Pairwise Alignments

Query, 880 a.a., histidine kinase from Herbaspirillum seropedicae SmR1

Subject, 1126 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  166 bits (420), Expect = 7e-45
 Identities = 126/441 (28%), Positives = 209/441 (47%), Gaps = 41/441 (9%)

Query: 398  REQLKLEKAVAARTQE---LRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQ 454
            R+   L K +AA  +    L+ A + A+ AN AKS ++  +SH+LRTPL ++LG+A +++
Sbjct: 644  RQNTALLKEIAAHKKTDAALQDAKERAESANRAKSRYVVGLSHELRTPLNAVLGYAQILE 703

Query: 455  ASGG---PHAGHGRIIMRSARHMLTMVNDLIDYARGDPLDTP-QPTPLYLHALLQEIAQE 510
                   P  G  + I RSA H+  +++ L+D ++ +          + +   L +I   
Sbjct: 704  RDETIPPPRQGAIKAIRRSADHLSGLIDGLLDISKIEAGKLQVYSNEINIQDFLDQIVDM 763

Query: 511  GQVLAQRQHNHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQAD 570
             +  AQ +   F  + +  LP  +  D +RL +IL NLL NA K+T  G I   V +++ 
Sbjct: 764  FRPQAQAKGIAFEHNRAASLPQYVRTDDKRLRQILVNLLSNALKFTERGHIRFDVAYRSQ 823

Query: 571  HADAGKGALQIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGG 630
             A          + D+G GI+ +   RIFEPF+R +A+ R PG+G+GL I RL  Q +GG
Sbjct: 824  VAS-------FTIEDSGRGISEKDLPRIFEPFQRGEAEYRMPGLGLGLTITRLLTQTLGG 876

Query: 631  SIVLESQPGMGTRMHLQL--------PAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVV 682
             I + S+   GT   ++L         A +   ++I S+H            G  R ++V
Sbjct: 877  EISVTSEKDKGTAFKVRLMLSAVDRPAALKDPVRNIKSYH------------GPRRTIIV 924

Query: 683  VEDSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGG 742
            V+D+ +   L+ + L+ L F V     G   +A       +   P L L D  +PG+ G 
Sbjct: 925  VDDNADHRDLMRELLAPLDFTVLAAASGAACLA-----LAEHTEPDLFLIDISMPGMSGW 979

Query: 743  AVLQAARRLLPEVPVLLLSATLHACEVELDGDLRFDGSLLKPVNFSELQEMIAQLLQLPL 802
             ++   R      P ++LSA +   +    G +  D +L KP    +L + +A  L+L  
Sbjct: 980  DLVTRLREAGQSAPAIMLSANIG--DGSAAGAIGHDDALAKPFGLRQLTDKLAIHLKLEW 1037

Query: 803  LGSTASSASSGGSVGEVVAMP 823
            +       +SG      VA P
Sbjct: 1038 IYDDGPKETSGTDKTTAVASP 1058