Pairwise Alignments

Query, 880 a.a., histidine kinase from Herbaspirillum seropedicae SmR1

Subject, 917 a.a., sensory histidine kinase from Sinorhizobium meliloti 1021

 Score =  159 bits (402), Expect = 7e-43
 Identities = 122/396 (30%), Positives = 205/396 (51%), Gaps = 31/396 (7%)

Query: 410 RTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGRI--- 466
           R  EL +A   A+ AN AKS FL  +SH+LRTPL +I+G+++M+      H     +   
Sbjct: 403 RQVELERAKSHAESANEAKSRFLASMSHELRTPLNAIIGYSEMLIEEARDHEDEELVPDL 462

Query: 467 --IMRSARHMLTMVNDLIDYAR--GDPLDTPQPTPLYLHALLQEIAQEGQVLAQRQHNHF 522
             I  + RH+L+++ND++D ++   + ++    T   +  LL+++A     L  R  N F
Sbjct: 463 DKIASAGRHLLSLINDILDLSKIEANKMEVFLET-FSVADLLRDVAATVAPLMARNGNEF 521

Query: 523 TLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKGALQIE 582
           T D   DL  + + D  +L + L NLL NAAK+T  GR+ L V+ +       +  L  +
Sbjct: 522 TQDFEADLGEMHS-DQTKLRQNLFNLLSNAAKFTNGGRVTLRVRRE---QRPDRDWLVFQ 577

Query: 583 VSDTGCGIAPQFQSRIFEPFERADAD--RRQPGIGMGLAIVRLWVQRMGGSIVLESQPGM 640
           V+DTG G++P+ Q R+F  F +ADA   R   G G+GL+I R + + +GG + +ES+ G 
Sbjct: 578 VTDTGIGMSPEQQERLFNAFTQADASTTRNYGGTGLGLSITRSFCRMIGGVVTVESEVGK 637

Query: 641 GTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQLSSL 700
           G+   +++PA+   E D          +  V   G+GR  ++++D P    L++  L+  
Sbjct: 638 GSVFTMEVPAQCEREAD-------GSPAEPVPQVGSGRTALIIDDEPAARSLIAKALAEA 690

Query: 701 GFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARR--LLPEVPVL 758
           G A     +G+  +A        +  P  ++ D ++P   G +VL+A +    L  +PV+
Sbjct: 691 GLASIEASNGQEGLA-----AARKHRPDAIILDIIMPHQDGWSVLRALKNDPELCTIPVI 745

Query: 759 LLSATLHACEVELDGDLRFDGSLLKPVNFSELQEMI 794
           L  AT+ A + EL   L     L KP++  +L   I
Sbjct: 746 L--ATILA-DRELGLSLGAVEYLTKPIDTDKLVRTI 778



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 675 GAGRQVVVVEDSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDY 734
           G    V+VV+D       L   L    + V   GDG   +  +  +      P LVL D 
Sbjct: 783 GGKHDVLVVDDDQASREFLRRILVKRKWTVHEAGDGIRGLEMMKRIL-----PRLVLLDL 837

Query: 735 LLPGVHGGAVLQAARRL--LPEVPVLLL-SATLHACEVE 770
           L+P + G   L   +R+  L  +PV+++ S  L A E++
Sbjct: 838 LMPEMDGFQTLSEMQRIPELQNIPVVVVTSKDLSASELK 876