Pairwise Alignments

Query, 400 a.a., hemolysin D from Herbaspirillum seropedicae SmR1

Subject, 397 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Klebsiella michiganensis M5al

 Score =  372 bits (954), Expect = e-107
 Identities = 196/367 (53%), Positives = 259/367 (70%), Gaps = 1/367 (0%)

Query: 9   PVAALTALAILSVLSACGKPPGGAPPAAGTPVLGVVTVHAQPVELHTELPGRTSPYQIAD 68
           P+A +  L+    L+ C   P     A   P +G+VT+ + P+++ TELPGRTS Y++A+
Sbjct: 9   PLAVVLMLSGSLALTGCDDKPA-QQGAQQMPEVGIVTLKSAPLQITTELPGRTSAYRVAE 67

Query: 69  VRPQVNGIIKARSFREGSDVKAGQVLYQINPASYQAAYDSSVAALAKAEASVRTARLKAS 128
           VRPQV+GII  R+F EGSD++AG  LYQI+PA+YQA Y+S+   LAKA+A+    +L   
Sbjct: 68  VRPQVSGIILKRNFTEGSDIQAGVSLYQIDPATYQATYESAKGDLAKAQAAANMDQLTVK 127

Query: 129 RYKELVAIKAVSQQDYDDAVASLGEAEADVGSARANVQTSRINLDYARLDAPISGRIGKS 188
           RY++L+  K +SQQDYD AVA+  ++ A V +A+A V+T+RINL Y ++ +PISGRIGKS
Sbjct: 128 RYQKLLGTKYISQQDYDTAVATAQQSNAAVVAAKAAVETARINLAYTKVTSPISGRIGKS 187

Query: 189 SVTPGALVTANQTTALTTIQQLDPIYVDVTQSSTTWLNLKEALANGQLEKSGNGAKVRLV 248
           +VT GALV   QTTAL T+QQLDPIYVDVTQSS  +L LK+ LANG+L++    AKV LV
Sbjct: 188 AVTEGALVQNGQTTALATVQQLDPIYVDVTQSSNDFLRLKQELANGKLQQENGKAKVELV 247

Query: 249 LENGRTYAQEGTLQFSDVTVNQDTGAITLRAIFPNPKTDLLPGMYVRAVLQEGVRQQGLL 308
             +G  Y Q GTL+FSDVTV+Q TG+ITLRAIFPNP   LLPGM+VRA L+EGV    LL
Sbjct: 248 TNDGLKYPQNGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGVNPDALL 307

Query: 309 VPQQAVSRDGAGKPVAFVVNAQGVVEQRALVTDRAIGDQWLVSSGLKEGDQLVVDGQQRA 368
           VPQQ V+R   G   A VV     VE R +   +AIGD+WLV+ GLK GD++++ G Q+ 
Sbjct: 308 VPQQGVTRTPRGDASAMVVGEGDKVEVRQITATQAIGDKWLVTEGLKTGDRVIITGLQKV 367

Query: 369 SAGAKVK 375
             G +VK
Sbjct: 368 RPGVQVK 374