Pairwise Alignments

Query, 758 a.a., ATP-dependent DNA helicase from Herbaspirillum seropedicae SmR1

Subject, 714 a.a., ATP-dependent helicase DinG/Rad3 from Pseudomonas fluorescens FW300-N2E2

 Score = 53.9 bits (128), Expect = 3e-11
 Identities = 61/221 (27%), Positives = 89/221 (40%), Gaps = 8/221 (3%)

Query: 528 AHATTLFSATL---GPWHYFADLLGMPKDTAWIDVESPFHASQLEVRVAQDISTRWQRRS 584
           A+   + SATL   G +  F    G+PK      V SPFH +   V    D+    +  +
Sbjct: 476 AYGALVTSATLTALGTFDRFRMRAGLPKKAVTAVVPSPFHHADAGVLRVPDLKADPRDAA 535

Query: 585 ASIAPITALMARQFHQRPGNYLAFFSSFDYLQQALAAFTRAHPDIPTWQQSRGMSEAERE 644
           A  A I   +        G  L  FSS   +Q       R        Q +    E   +
Sbjct: 536 AHTAAIIRDLPELVEGSRGT-LVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNK 594

Query: 645 AFLARFVVGGRGIGFAVLGGSFGEGVDLPGERLIGAFVATLGLPQVNE-VNEQLRLRMQA 703
              AR   G   + F +   SF EGVDLPG       +A +     ++ V   L   ++A
Sbjct: 595 -HKARVDGGDSSVLFGL--ASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALAEWIEA 651

Query: 704 LFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWLIDER 744
             G  +    +     K+VQA GR++RTE D+G + L+D R
Sbjct: 652 RGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRR 692