Pairwise Alignments

Query, 758 a.a., ATP-dependent DNA helicase from Herbaspirillum seropedicae SmR1

Subject, 669 a.a., ATP-dependent DNA helicase from Methanococcus maripaludis JJ

 Score = 55.5 bits (132), Expect = 9e-12
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 19/226 (8%)

Query: 535 SATLGPWHYFADLLGMPKDTAWIDVESPFHASQLEVRVAQD------ISTRWQRRSASIA 588
           SATLG     A   GM +    + ++SPF   +  +    D       S  +Q  +    
Sbjct: 399 SATLGDLKIHAIKTGMGRSETLL-LDSPFSKDRRNIIALSDGEDMKFNSIDFQSNNKKRN 457

Query: 589 PITALMARQFHQRPGNYLAFFSSFDYLQQALAAFTRAHPDIPTWQQSRGMSEAEREAFLA 648
                + +  +   GN L  F SF  L+ A   F  A      +    GM     +    
Sbjct: 458 KANENLFKMVNAAKGNTLILFKSFGDLKTAHEYFLDARYRGNIYCYESGMDGKAAKKLKE 517

Query: 649 RFVVGGRGIGFAVLGGSFGEGVDLPGERLIGAFVATLGLP--------QVNEVNEQLRLR 700
            F   G   G  +  G F EGVD+PG+ L    + +L  P        +   + E+L+ R
Sbjct: 518 DFQKYG---GLLLATGRFAEGVDIPGDALTCVIIDSLPFPVPTPLLKREQTLLEERLKSR 574

Query: 701 -MQALFGAGYDYTYLYPGLQKVVQAAGRVIRTESDQGVVWLIDERF 745
            ++    + +  T  +   + V+Q  GR+IRTE+D GVV + D+RF
Sbjct: 575 KVKDAHWSAFLMTSFHIMARTVIQMIGRLIRTETDYGVVVIQDKRF 620



 Score = 45.4 bits (106), Expect = 9e-09
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 192 RFPHGDFRPGQRQLAEAVFRAHAGRRSLLAQAPTGIGKTLGTLFPALKAAPR 243
           +FP+   RP Q  L   ++     +++L+ +APTG+GKTL  L PAL  A R
Sbjct: 13  KFPYHGMRPQQEVLMGKIYECVTKKKNLVVEAPTGVGKTLSYLIPALYFAER 64