Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (303), Expect = 2e-32
 Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 8/299 (2%)

Query: 7   KLPPLDLLRGFVAVGRRMSFTLAAQDLFLTQSAVSRQVLLLEQYMQTPLLQRHHRSISFT 66
           +LPPL+ L+ F A  R +SFT AA++LF+TQ+AVS Q+  LE+++   L +R +RS+  T
Sbjct: 4   RLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLT 63

Query: 67  PMGERLFRSADAALLQLQDSLGELRAAQAARPVTITASIGMTGLWLLPRLSRLQQQVPGV 126
             G+  F         L ++  +L        +TI+        WL+PRL+   QQ P +
Sbjct: 64  EEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDI 123

Query: 127 DVRVAASDSTIDLRHEGIDLALRYTRRVHAPADAIRLFGESVAPVAHPLLLKNGKLPADA 186
           DVR+ A D       + +D+A+ Y R       A +L+ E + P+  P LL   K     
Sbjct: 124 DVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEKL 183

Query: 187 TLLEFDQANPHLRWKSWLDHESLGKAGKIGKLGTISKKARMLRLNQYDMVIQAALAGQGV 246
           + L +         K W       +  K   L  ++     +  +   MV+QAA  GQGV
Sbjct: 184 SDLAYHTLLHDTSRKDW------KQFAKENGLDNVNVNHGPI-FSHSTMVLQAAAHGQGV 236

Query: 247 ALGRLELIAPQLEGGQLVLLADPRTQGDDGYAYWLIQAEPSPRREVQLIANWICAQARA 305
           ALG   L  P+++ G+L+   D     ++ + Y +   + +    +    +W+  +AR+
Sbjct: 237 ALGNNVLAQPEIDAGRLIAPFDEVLMTNNAF-YVVCHEKQADMGRIATFRDWMLKKARS 294