Pairwise Alignments

Query, 323 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Herbaspirillum seropedicae SmR1

Subject, 330 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase from Bifidobacterium breve UCC2003

 Score =  293 bits (750), Expect = 4e-84
 Identities = 158/322 (49%), Positives = 211/322 (65%), Gaps = 19/322 (5%)

Query: 10  ILLAQPRGFCAGVDRAIEIVERALAQFGA-----------PIYVRHEIVHNAYVVNDLRA 58
           ++LA PRGFCAGVDRAI  V+  L    +           P+YVR +IVHN +VV DL  
Sbjct: 5   VVLADPRGFCAGVDRAILTVQTILKAAESSGKLHREDGLPPVYVRRQIVHNKHVVEDLAG 64

Query: 59  KGAVFIEELADVP-----AGSTVIFSAHGVSKAIQAEAAERGLTVFDATCPLVTKVHMEV 113
           +GAVF++EL+++P     AG  V+FSAHGVS  +++EA  RG+ V DATCPLV KVH EV
Sbjct: 65  QGAVFVQELSEIPDAAAAAGIPVVFSAHGVSPVVKSEAQRRGMHVVDATCPLVGKVHREV 124

Query: 114 AKMRREGREIIMIGHAGHPEVEGTMGQTEAGMHLVETVEDVQRLQVADPALLAYVSQTTL 173
            +  REG EI+ IGH GH E  G +G++   +HL+E   DV  L  A    L  +SQTTL
Sbjct: 125 LRFVREGYEIVYIGHKGHDEAVGVVGESPEHVHLIEHESDVDSLDFAPDTKLVLLSQTTL 184

Query: 174 SVDDTAEIIAALRERFPAISEPKKGDICYATTNRQEAVKFMAPQVDVVIVVGSPNSSNSN 233
           SVD+TA  IAAL+ RFP I EP   DICYAT+NRQ AVK +A Q D V++VGS NSSNS 
Sbjct: 185 SVDETAGTIAALKARFPWIEEPPSSDICYATSNRQAAVKLVAQQSDCVVIVGSANSSNSV 244

Query: 234 RLRELAEK---KGVAAFMVDNAALIDPLWIQGRQRIGVTAGASAPEVLVQAVIDRIKEIG 290
           RL E+A++   +   A+ VD+A  +DP W +G + +G+++GAS P+ LV  VID ++  G
Sbjct: 245 RLMEVAQEGLGERGKAYRVDDANELDPSWFEGVESVGISSGASVPDELVSGVIDTLRNQG 304

Query: 291 ARSVRVLEGIEENVTFPLPKGL 312
              ++ +E I+EN+ F LP  L
Sbjct: 305 FTGMKSVETIKENMHFVLPAEL 326