Pairwise Alignments

Query, 359 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 341 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  303 bits (777), Expect = 3e-87
 Identities = 157/322 (48%), Positives = 223/322 (69%), Gaps = 13/322 (4%)

Query: 30  LVRPLGALAVLLLIDFLLVPGFFKLEIKDGHLYGALIDIINRAAPLMLAALGMTLVIATR 89
           L+  L ALA +++   ++ PGF  L+I++G LYG+++DI+NR AP++L A+GMT+VIAT+
Sbjct: 12  LLPQLIALAAIVVAISIVFPGFLNLQIQNGRLYGSMVDILNRGAPVVLLAIGMTVVIATK 71

Query: 90  GVDISVGAVVAISGAVAAILIGGKMVVVDGVSQYVSNVPMVWALCAAMGAALLCGAWNGL 149
           G+D+SVGAV+AI GAVAA LI              S   +   L A +   ++CG WNG+
Sbjct: 72  GIDLSVGAVMAICGAVAASLI-------------TSGHSLAETLLATLAVGIVCGIWNGV 118

Query: 150 LVAGLGLQPIIATLILMVAGRGLAQLLTDGQIVTVYYKPFFFLGGGYLFGLPFSLYIAAA 209
           LVA L +QPIIATL+LMVAGRG+AQL+T+G I+T       F+G G   GLP  L I   
Sbjct: 119 LVAVLDIQPIIATLVLMVAGRGIAQLITEGTILTFNDPGLIFIGSGSFAGLPMPLVIWLV 178

Query: 210 MFVLLALLMKKTALGLFIESVGINPVASRLAGIRTAALIFFVYMFCSACAGLAGLMIASN 269
             +L+ALL+++TALG+ IE++GIN  AS L+G+ T  L+   Y+    CA +AG++ A++
Sbjct: 179 FGLLVALLVRRTALGMLIEAIGINRQASTLSGVLTPVLLVAAYVLSGLCAAIAGIIAAAD 238

Query: 270 IKSADANNAGLLLELDAILAVTLGGTSLAGGKFSLVGSVIGALIIQTLTYTIYSLGVPPE 329
           I+ ADANNAGL LELDAILAV +GGTSL GG+FS+  SV+GA+IIQ +   I   G PPE
Sbjct: 239 IRGADANNAGLWLELDAILAVVVGGTSLLGGRFSIAASVLGAVIIQAINTGILLSGFPPE 298

Query: 330 VNMVVKSIVVFLVCLSQSPQFR 351
            N+++K+ ++  + + QSP+FR
Sbjct: 299 FNLIIKAAIIIFILVLQSPRFR 320