Pairwise Alignments

Query, 359 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 334 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  203 bits (516), Expect = 6e-57
 Identities = 119/315 (37%), Positives = 187/315 (59%), Gaps = 17/315 (5%)

Query: 34  LGALAVLLLIDFLLVPGFFKLEIKDGHLYGALIDIINRAAPLMLAALGMTLVIATRGVDI 93
           + A   L+L + +  P F  L+  + +L         + A +++ A+GMTLVIAT G+D+
Sbjct: 29  VAAFLALILFNVVFTPNFLSLQTLNVNL--------TQVATIVIVAIGMTLVIATGGIDL 80

Query: 94  SVGAVVAISGAVAAILIGGKMVVVDGVSQYVSNVPMVWALCAAMG--AALLCGAWNGLLV 151
           SVG+++AI GA+A ++  G +  V       S++P+  AL   +   A  L G +NGLLV
Sbjct: 81  SVGSLMAIGGALAPMIFMGTLFPV-------SSMPVAVALAFVLPVVATGLLGLFNGLLV 133

Query: 152 AGLGLQPIIATLILMVAGRGLAQLLTDGQIVTVYYKPFFFLGGGYLFGLPFSLYIAAAMF 211
               +QPIIATL+L +AGRG+AQ++T+G +     + F F+  G + G+P  + +  A+ 
Sbjct: 134 TRFAIQPIIATLVLFIAGRGIAQVMTNGNLQVFRNEGFQFIALGRVAGIPAQVILMIAIA 193

Query: 212 VLLALLMKKTALGLFIESVGINPVASRLAGIRTAALIFFVYMFCSACAGLAGLMIASNIK 271
            +    ++ T  G  + +VG N  ASRL GI    +   VYM   A AG+AGL++ +   
Sbjct: 194 AIAWAAIRYTVFGRQVIAVGGNEKASRLTGIPVHRVKLLVYMISGALAGVAGLIVVARNS 253

Query: 272 SADANNAGLLLELDAILAVTLGGTSLAGGKFSLVGSVIGALIIQTLTYTIYSLGVPPEVN 331
           ++DAN  GL +ELDAI AV +GGT L GG+ ++VG+VIGAL+IQ + YT+ + GVP    
Sbjct: 254 ASDANLVGLGMELDAIAAVAVGGTLLTGGRANIVGTVIGALVIQLVRYTLLANGVPDAAA 313

Query: 332 MVVKSIVVFLVCLSQ 346
           ++VK+ ++ L    Q
Sbjct: 314 LIVKAALILLAVFIQ 328