Pairwise Alignments

Query, 359 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 339 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  189 bits (479), Expect = 1e-52
 Identities = 116/317 (36%), Positives = 175/317 (55%), Gaps = 26/317 (8%)

Query: 37  LAVLLLIDFLLVPGFFKLEIKDGHLYGALIDIINRAAPLMLAALGMTLVIATRGVDISVG 96
           L VLL++     P F +++         L++I    +   + A GMT VI T G+D+SVG
Sbjct: 31  LLVLLILMSTFAPNFNRVD--------NLLNIARSISVNAILAAGMTFVILTSGIDLSVG 82

Query: 97  AVVAISGAVAAILIGGKMVVVDGVSQYVSNVPMVWALCAAMGAALLCGAWNGLLVAGLGL 156
           ++VA+SG V+ +               ++ +P   A+ A +G   LCG  NG+L A L L
Sbjct: 83  SIVAVSGVVSVVAA-------------MAGIPAPLAILAGVGVGALCGLLNGVLTAYLAL 129

Query: 157 QPIIATLILMVAGRGLAQLLTDGQIVTVYYKPFFFLGGGYLFGLPFSLYIAAAMFVLLAL 216
            P I TL  M   RG+A  +T+GQ +      F  LG GYL G+P  + I   +++L   
Sbjct: 130 APFIVTLGTMTFLRGMAYTITEGQPIVSSSLSFRELGNGYLIGIPIPVIIMLVVYLLAWF 189

Query: 217 LMKKTALGLFIESVGINPVASRLAGIRTAALIFFVYMFCSACAGLAGLMIASNIKSADAN 276
           ++++T  G  I +VG N  A+RLAG+R   ++  VYM    CAGLAG++ A+ + SA   
Sbjct: 190 ILERTRFGRHIYAVGGNAQAARLAGVRVKRVLAAVYMIAGVCAGLAGIIFAARVISAQP- 248

Query: 277 NAGLLLELDAILAVTLGGTSLAGGKFSLVGSVIGALIIQTLTYTIYSLGVPPEVNMVVKS 336
            AG   ELDAI AV LGGTSLAGG+  ++G++IG++I+  L+  +  L VP    +++K 
Sbjct: 249 TAGTGYELDAIAAVVLGGTSLAGGRGRIIGTLIGSIILGVLSTGLILLSVPFFTQLLIKG 308

Query: 337 IVVFLVC----LSQSPQ 349
           IV+ L      L Q P+
Sbjct: 309 IVIILAVAIDGLKQHPE 325