Pairwise Alignments

Query, 359 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 351 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  160 bits (405), Expect = 5e-44
 Identities = 111/304 (36%), Positives = 159/304 (52%), Gaps = 11/304 (3%)

Query: 43  IDFLLVPGFFKLEIKDGHLYGALIDIINRAAPLMLAALGMTLVIATRGVDISVGAVVAIS 102
           I  LLV  FF + + +      L+ +    A   L A+GMTLVI T G+D+SVGAV  I 
Sbjct: 18  IALLLVIAFFSVMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGIC 77

Query: 103 GAVAAILIGGKMVVVDGVSQYVSNVPMVWALCAAMGAALLCGAWNGLLVAGLGLQPIIAT 162
           G VA  L+   + + +G S    NVP V  LC A+   L+ G  NG ++   G+ P I T
Sbjct: 78  GMVAGALLTNGLPLWNG-SVIFFNVPEV-ILCVALFGVLV-GFVNGAVITRFGVAPFICT 134

Query: 163 LILMVAGRGLAQLLTDGQ-------IVTVYYKPFFFLGGGYLFGLPFSLYIAAAMFVLLA 215
           L +M   RG A L  DG        +  +    F  LG G L G+   +++     +L  
Sbjct: 135 LGMMYVARGSALLFNDGSTYPNLNGMEALGNTGFSTLGSGTLMGIYLPIWLMIGFLLLGY 194

Query: 216 LLMKKTALGLFIESVGINPVASRLAGIRTAALIFFVYMFCSACAGLAGLMIASNIKSADA 275
            L  KT LG +I ++G N  A+RLAG+       FVY F   C+   GL++AS +++A  
Sbjct: 195 WLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCSAFVGLIVASQLQTAHP 254

Query: 276 NNAGLLLELDAILAVTLGGTSLAGGKFSLVGSVIGALIIQTLTYTIYSLGVPPEVNMVVK 335
              G + E+DAI A  LGGT+LAGG+  + GS+IGA +I  L   +  +GV     MV+K
Sbjct: 255 -MTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMVIK 313

Query: 336 SIVV 339
            +V+
Sbjct: 314 GVVI 317