Pairwise Alignments

Query, 359 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 321 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  172 bits (435), Expect = 1e-47
 Identities = 117/317 (36%), Positives = 178/317 (56%), Gaps = 26/317 (8%)

Query: 32  RPLGALAVLLLIDFLLVPGFFKLEIKDGHLYGALIDIINRAAPLMLAALGMTLVIATRGV 91
           + L AL VL+ I   + P FF +          L +I+ + +   + A+GMTLVI T G+
Sbjct: 21  KSLIALLVLIAIVSTMSPNFFTVN--------NLFNILQQTSVNAIMAVGMTLVILTSGI 72

Query: 92  DISVGAVVAISGAVAAILIGGKMVVVDGVSQYVSNVPMVWALCAAMGAALLCGAWNGLLV 151
           D+SVG+++A++GAVAA ++G ++           N  +  A   A+GAA+  GA  G++V
Sbjct: 73  DLSVGSLLALTGAVAASIVGIEV-----------NALVAVAAALALGAAI--GAVTGVIV 119

Query: 152 AGLGLQPIIATLILMVAGRGLAQLLTDGQIVTVYYKP----FFFLGGGYLFGLPFSLYIA 207
           A   +Q  IATL++M+  RG+  + T+G  V   +      F + G G   G+P  ++I 
Sbjct: 120 AKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTDNADLFGWFGIGRPLGIPTPVWIM 179

Query: 208 AAMFVLLALLMKKTALGLFIESVGINPVASRLAGIRTAALIFFVYMFCSACAGLAGLMIA 267
           A +F+    ++  T LG +I ++G N  A+RL+GI    +   VY  C   A LAG++  
Sbjct: 180 AIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGMLASLAGIIEV 239

Query: 268 SNIKSADANNAGLLLELDAILAVTLGGTSLAGGKFSLVGSVIGALIIQTLTYTIYSLGVP 327
           + + SA    AG   ELDAI AV LGGTSLAGGK  +VG++IGALI+  L   +  LGV 
Sbjct: 240 ARLSSAQPT-AGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVS 298

Query: 328 PEVNMVVKSIVVFLVCL 344
               M+VK++V+ L  L
Sbjct: 299 SYYQMIVKAVVILLAVL 315