Pairwise Alignments

Query, 150 a.a., RbsD or FucU transport protein from Herbaspirillum seropedicae SmR1

Subject, 139 a.a., D-ribose pyranase from Vibrio cholerae E7946 ATCC 55056

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 26/149 (17%)

Query: 8   LLNADVLYALRAMGHGDELVLCDANFPADSVARQTVLGKVLRID-----GVGT-TEAARA 61
           LLN+++ Y +  +GH DE+ +CDA  P        +  +V RID     GV +  E  R 
Sbjct: 6   LLNSELSYLVATLGHTDEITICDAGLP--------IPDEVTRIDLALTHGVPSFLETVRV 57

Query: 62  ILSVLPLDNAVEQPVRRMEIMGEPATIPPVQQE-LQQEVNQAE---GRARPLGSIERFAF 117
           ILS        E  +  + +  E A + PV  E L +E+   E   G+   +  I   AF
Sbjct: 58  ILS--------ESQIESVIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAF 109

Query: 118 YEAAKKAYCVIATGERRFYGCFLLKKGVL 146
            +   ++  V+ TGE   Y   + + GV+
Sbjct: 110 KQRTLQSRAVVRTGECTPYANVIFQAGVV 138