Pairwise Alignments

Query, 288 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 293 a.a., transcriptional regulator, LysR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  122 bits (305), Expect = 1e-32
 Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 13/293 (4%)

Query: 2   DWDNARIFLAIYRVGTLRGAAETLELDQATVGRRLAALERSLGARLFLRTPNGYVPTPAG 61
           +WD  R    + R+GT+ GAAE L +  ATV R + +LE  LG +LF R   GY  T AG
Sbjct: 5   NWDEVRTAFQVARLGTVSGAAEVLGVHHATVIRHIDSLEGRLGVKLFQRHARGYTATDAG 64

Query: 62  EMAAAAAQQMEQGAEQLQRQMQGIDERLCGVVRLAATDVTARHFLIPALHRLRQEHPHIR 121
           +     AQ      EQL  ++ G   ++ G + + + ++ +   + P L   ++EH  + 
Sbjct: 65  KDLLQVAQVTADQLEQLSGRLHGHGAQVTGELVITSLEILS-PLIAPVLAEFQREHRDVM 123

Query: 122 VVLSTSTQITNLTKREADIAVRTLR-PDAPDLIARHLKRLHTAIYASRSYVKKRGLPEPG 180
           V L T  ++  L   EA +A+R  R P+ PD I + L     A + +  Y+   G  E G
Sbjct: 124 VKLITDARVFRLEYGEAHVAIRAGRKPEDPDNIVQPLYIQKMAFFGTPEYLDTHGPIEIG 183

Query: 181 TGLKGHDVVIYQRSVSPAKSEQICGESIINAQVAMEVSTGLVMYDCLQAGFGLGELPTHV 240
               GH +V        A       E++   +V    S      D + AG G G LP   
Sbjct: 184 GDYAGHRIVGSTLDEPRAPFNIWMQENMPAERVVYRASDIRGAGDAVVAGVGAGLLPVWW 243

Query: 241 GDKASGLVRV------WPQRETPYDMWLVLHSDLNRTARVRAVADAIIAAYEA 287
            DK  G+VR+      W  R     +WL+ H DL+RTA+V++   ++ AA +A
Sbjct: 244 ADKYPGVVRLCDPIDAWSSR-----IWLITHVDLHRTAKVQSFTGSLKAAAKA 291