Pairwise Alignments

Query, 504 a.a., amidase from Herbaspirillum seropedicae SmR1

Subject, 501 a.a., aspartyl/glutamyl-tRNA amidotransferase subunit A (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  186 bits (472), Expect = 2e-51
 Identities = 133/418 (31%), Positives = 201/418 (48%), Gaps = 14/418 (3%)

Query: 88  LAGRTVVLKDNVALAGVPMMNGSSTLEGFVPSYDATIVTRLLDAGATILGKATCEHFCLS 147
           L G  + +KD +  AG     GS  L  F P YDA  V +L +AGA ILGK   + F + 
Sbjct: 74  LWGVPLTVKDALTTAGTRTTCGSRILGDFTPHYDAFAVGKLREAGAVILGKTNMDEFAMG 133

Query: 148 GGSHTSDPAPVHNPRRHGYGSGGSSSGSAALVAAGEADMAIGGDQGGSIRIPSAFCGTYG 207
             +  S   P  NP       GGSS GSAA VAAG+   ++G D GGSIR P++ CG  G
Sbjct: 134 SSTENSAFGPTRNPWNVARVPGGSSGGSAASVAAGQCFGSLGTDTGGSIRQPASLCGCVG 193

Query: 208 MKATHGLVPYTGVMPIEATVDHVGPITANVRDNALMLEVIAGADGLDPRQYAPEVQPYTA 267
           +K T+G V   G++   +++D +GP+T  V D AL+L VIAG D  D       V  Y  
Sbjct: 194 LKPTYGRVSRFGLVAYGSSLDQIGPLTRTVEDAALLLSVIAGHDPRDATSATLPVDDYMG 253

Query: 268 AL--DRGVRGLKIGILTEGFALGNMDKRVADKVQEAIAQLEKLGASVATVSVEEHALAGA 325
           AL   + + G++IG+  E F    +D  V+   + A+     LGA++  V +     + A
Sbjct: 254 ALASRKDLSGVRIGVPRE-FRGEGIDPEVSAACEAALDTARGLGATIVDVELPHTPYSIA 312

Query: 326 LWQPIGCEGLTMQMMHGNGMGFNWKGLYDLGLLQHHAHWREHADDLSATLKLCMFVGQYG 385
            +  I     +  +   +G+ +  +      L   +   R  A+     ++  + +G Y 
Sbjct: 313 AYYIIAPAEASSNLARFDGVRYGRRAESPRDLADLYV--RSRAEGFGDEVQRRIMLGTYV 370

Query: 386 LTR-YQGRFYAKAQNIARRARAGYDKALADFDLLVMPTVPIIAQPL-PAAGCPLAEYVAR 443
           L+  Y   +Y KA  + R  R  Y+KAL+  D+L  P  P+ A  L      PL  Y+  
Sbjct: 371 LSSGYYDAYYRKAAQVRRLIREDYEKALSRCDVLCGPASPVTAWGLGELTSDPLKMYMMD 430

Query: 444 AFEMIGNTAPLDITGHPAMSIP--CGTVDGLPVGLMLVGKHYAEATLYQAAAAFEASM 499
            F     T  L++ G P + IP   G+  G+PVGL ++G+ + E  L  AA     ++
Sbjct: 431 VF-----TLSLNLAGLPGLCIPVGMGSRSGMPVGLQMLGRAFGEGDLLAAANVLSGAL 483