Pairwise Alignments

Query, 409 a.a., phage late control protein from Herbaspirillum seropedicae SmR1

Subject, 361 a.a., late control gene D protein from Klebsiella michiganensis M5al

 Score =  285 bits (728), Expect = 2e-81
 Identities = 150/344 (43%), Positives = 214/344 (62%), Gaps = 23/344 (6%)

Query: 6   PAFRIIIEEKDISRPVSDRLISITLRECRGDEADQLDIELDDGDGKLKIPPMGAKLSFAL 65
           PAFRI+IE KD ++ +  RL+ +TL + RG EADQLD+ELDD DG + +P  GA +S AL
Sbjct: 14  PAFRIVIEGKDATQTLDKRLLGMTLTDNRGFEADQLDLELDDADGLVIMPRRGAVISLAL 73

Query: 66  GWQGSPLVDKGAFVVSEVEHSGSPDRITIRARSASMIDAFRQQRDRSFHETTLGAVVDAV 125
           GW+G PL  KG F V E+EHSGSPDR+TIRARSA   +    +R++S+H+TT+G VV  +
Sbjct: 74  GWKGEPLFSKGKFTVDEIEHSGSPDRLTIRARSADFRETLNVRREKSWHKTTVGEVVKEI 133

Query: 126 AASNGLASGISASLRAIAIKHLDQTHESDSALLRRLGKKYDAVATVKNDTLLFMPINDSR 185
           AA + L   I   +   A+ HLDQT+ESD++ L +L ++Y A+A+VK+  LLF+     +
Sbjct: 134 AARHSLKVAIGKDVAEQALDHLDQTNESDASFLMKLARQYGAIASVKDSNLLFIRQGQGK 193

Query: 186 TASGKPLPVVKVVRALGDQHRYHSSESDAYSGVRAFWM---------DEKYGRRRSVVAG 236
           TASGK LPV+ + R  GD HR+  ++  AY+GV A W+           K  RRR     
Sbjct: 194 TASGKALPVITITRRDGDSHRFSLADRGAYTGVIAHWLHTREPEKKETTKVKRRRKTTKP 253

Query: 237 QAGNSKR-------------LRTTFANEADARTAAVAEWQRIERGLATFEMQLALGDARI 283
           +   +K+             L  T+AN ++A  AA   W+R++RG+A+F +QLA G A +
Sbjct: 254 KEPEAKQGDYLIGTDENVLVLNRTYANRSNAERAAKMNWERLQRGVASFSLQLAEGRADL 313

Query: 284 MPQSPVVVSGFKADIDTTEWLSKTVTHSIN-GNGFTTRIEFETK 326
             + PV V+GFK  ID   W   T+TH++N  +GFTT ++ E K
Sbjct: 314 YTEMPVKVTGFKQPIDDASWTITTLTHTVNPDSGFTTSLDLEVK 357



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 14/37 (37%), Positives = 24/37 (64%)

Query: 361 RGTELAGKADNAKTLKRTYASKQSAKRAAALEWAKIK 397
           +G  L G  +N   L RTYA++ +A+RAA + W +++
Sbjct: 260 QGDYLIGTDENVLVLNRTYANRSNAERAAKMNWERLQ 296