Pairwise Alignments

Query, 683 a.a., replication protein from Herbaspirillum seropedicae SmR1

Subject, 803 a.a., bacteriophage replication gene A protein from Klebsiella michiganensis M5al

 Score =  196 bits (499), Expect = 3e-54
 Identities = 139/440 (31%), Positives = 213/440 (48%), Gaps = 40/440 (9%)

Query: 135 IARVVDPRWWRRQLRKVVGRAFEGGNIRLGYVHYHGEPYASNDAVLARMAQNKRNAAALE 194
           +AR++   WW R+L ++     E     +  V+    PY S +AV+ +  Q +++    +
Sbjct: 275 LARMLCADWWYRKLWQMRCEWREEQLRAVCLVNRKASPYVSYEAVIHKREQRRKSLEFFQ 334

Query: 195 ATMVRNEAGQEFSIAELAEKTTANKAIRRGELMLRINGFEMIARDCGDTGLFLTWSCPSR 254
           +  + N  G    + ++   +++N A RR E+M  + G E+IA   GD  +F T +CPSR
Sbjct: 335 SHELVNADGDTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSR 394

Query: 255 FHRTLHSGKPNPKYDGSDPRTANKYLGKVTALARSALARRGIGLYGFRIAEPHHDGCPHW 314
           FH TL++G+PNPK+     R ++ YL    A  R A+ + G+  YG R+AEPHHDG  HW
Sbjct: 395 FHATLNNGRPNPKWTSETVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHW 454

Query: 315 HMLVFVRALPGYTTPHVKDVASRAIRVMKRYAWRVDRGEPG-SFKRRLDVKRIDWAKGSA 373
           H+L F+R          K        +++++A R DR E G +   R   + I+  KG+ 
Sbjct: 455 HLLCFMR----------KKDRRTLTALLRKFAIREDRAELGNNTGPRFKSELINPRKGTP 504

Query: 374 AGYIAKYVAKNID--GVADHKTKEGYVVTTDTAGDYELTPSARVEAWAARWGIRQFQQWG 431
             YIAKY++KNID  G+A   +KE      D+A          V AWA+   ++QF+ +G
Sbjct: 505 TSYIAKYISKNIDGRGLAKEISKETGKSLRDSA--------EHVSAWASLHRVQQFRFFG 556

Query: 432 GAPVSIWRELR-------RVPADMMQEAPPAMAAAWDAVQKVEGEKRACWASYLRAQGGA 484
                 +RELR       R   D     P       DAV  +      C+A+Y+  QGG 
Sbjct: 557 IPGRQAYRELRLLAGQAARAQGDKKAGVPVLENPRLDAV--LAAADVGCFATYIMKQGGV 614

Query: 485 LVKRDDLMVTLAKETKTVAGRYEERERVMPYGVQCRQMAGVV------FKSVRHTWIPIQ 538
           LV R + ++  A E     G Y +   +  YG+    + G +      +K VR     + 
Sbjct: 615 LVPRKNHLIRTAYELNDEPGTYGD-HGIRIYGIWSPIVEGRICTHAMKWKMVRKA---VD 670

Query: 539 GTEARASAGLGFPWTRVNNC 558
             EA A  G   PWTR NNC
Sbjct: 671 VQEATADQGACAPWTRGNNC 690