Pairwise Alignments

Query, 598 a.a., DNA primase from Herbaspirillum seropedicae SmR1

Subject, 667 a.a., DNA primase from Sinorhizobium meliloti 1021

 Score =  269 bits (687), Expect = 3e-76
 Identities = 163/418 (38%), Positives = 228/418 (54%), Gaps = 22/418 (5%)

Query: 5   SFIQDLLNRVDIVDVVGRYVQLKKGGAN-----FMGLCPFHNEKSPSFTVSPTKQFYHCF 59
           SF+ ++ +RV I DV+G+ V   +   N     +   CPFH EKSPSF     K  YHCF
Sbjct: 6   SFLDEIRDRVPISDVIGKRVTWDRRKTNVSRGDYWACCPFHGEKSPSFHCEDRKGRYHCF 65

Query: 60  GCGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDV 119
           GCG  G    FL E  G+ F EAV+ +A   G+ +P+ +   P A+++E++  S  L DV
Sbjct: 66  GCGVSGDHFRFLTELEGLSFPEAVQQIADLAGVPMPQPD---PQAEQRERERTS--LLDV 120

Query: 120 MTRANDFYRHQLRSAQ--PAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPD--YDN 175
           M  A  F++ QL++A    A AYL+ RGLTG     F LG++PD  ++L++         
Sbjct: 121 MELATQFFQDQLQTANGAKARAYLRERGLTGRTIETFRLGFAPDSRNALKEFLAGKGIGK 180

Query: 176 EALVESGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEP-KYLNS 234
           E +   GLV+     G      YDRFR RIMFPI + + +VI FGGR M    P KYLNS
Sbjct: 181 EQIEACGLVV----HGDGIPVSYDRFRDRIMFPIPSAREKVIAFGGRAMSPDAPAKYLNS 236

Query: 235 PETPLFQKGSELYGLFEARQAIREA---GYALVTEGYMDVVALAQLGFPQAVATLGTACT 291
            ET LF KG+ L+    AR+A + A   G  +  EGYMDV+AL Q G   AVA LGTA T
Sbjct: 237 NETELFHKGNVLFNFARARRASQGADGAGTIIAVEGYMDVIALHQAGIENAVAPLGTALT 296

Query: 292 PIHVQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYV 351
              +  L + T Q +  FDGD AG RAA RA++  LPH    ++++F  LP+  DPD  V
Sbjct: 297 ENQLDLLWKMTTQPVLCFDGDGAGVRAAHRAVDLALPHLKPGRSVRFALLPEGKDPDDVV 356

Query: 352 REMGAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALR 409
           R  G   F++ +  A  L+  + +  +   D  TPE RA  +   + +   +   ++R
Sbjct: 357 RHDGREPFDKVLANARSLADMVWQREVQGGDFDTPEKRAELEARLRQVTSVIADESVR 414