Pairwise Alignments

Query, 148 a.a., aspartyl-tRNA amidotransferase subunit B from Herbaspirillum seropedicae SmR1

Subject, 135 a.a., conserved hypothetical protein with a conserved domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 97.8 bits (242), Expect = 6e-26
 Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 15  MRAKDMGKLGTIRLLTAAMKQKEVDERVE--LTDAHVLAIIDKMVKQRKDSISQFEAGGR 72
           M+AKD   L T+R +     + +        LTD   L II K+VKQ KDS   +   GR
Sbjct: 1   MKAKDKVALETLRNIKKFFIEAKTAPGANDTLTDEAALKIIQKLVKQGKDSAEIYIGQGR 60

Query: 73  QDLADVEKAELAVLSTYMPASLSDDEIKAEVQAAVAATGAAGPQDMGKVMGVLKPKLAGR 132
           QDLAD E A++AV+  Y+P  ++ +E++A ++  +A TGA   +DMGKVMGV   KLAG 
Sbjct: 61  QDLADGELAQVAVMEAYLPKQMTAEELEAALKEIIAETGATSGKDMGKVMGVASKKLAGL 120

Query: 133 ADMTAVSALVKAAL 146
           A+  A+SA VK  L
Sbjct: 121 AEGRAISAKVKELL 134