Pairwise Alignments

Query, 402 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 398 a.a., membrane protein from Klebsiella michiganensis M5al

 Score =  379 bits (972), Expect = e-109
 Identities = 202/405 (49%), Positives = 264/405 (65%), Gaps = 25/405 (6%)

Query: 9   FDVAIIGAGAAGMMCAAVAGQRGRRVVLIDHAGKLAEKIRISGGGRCNFTNVGAGPQHYL 68
           FD  +IGAGAAGM CAA AGQ G RV+L+D+  K   KI +SGGGRCNFTN+   P  YL
Sbjct: 4   FDAIVIGAGAAGMFCAAQAGQAGCRVLLLDNGKKPGRKILMSGGGRCNFTNMYIEPAAYL 63

Query: 69  SQNPHFCRSALSRYTPQDFIGLVKRHRIGFHEKHKGQLFCDDSAEDIIAMLKAECDAGNV 128
           SQNPHFC+SAL+RYT  DFI LV ++ I +HEK  GQLFCDDSAE I+ +L AEC+ G V
Sbjct: 64  SQNPHFCKSALARYTQWDFIDLVGKYGIAWHEKTLGQLFCDDSAEQIVNLLLAECEKGGV 123

Query: 129 SWRMPCTVQEVGKSSEHFRIATSAGEIQAASLVIATGGLSIPKIGATDFAYRIARQFDLK 188
             R+   +  V +  E + +  +   + A  LV+A+GGLS+P +GA+ F Y++A QF LK
Sbjct: 124 EIRLRSEIISVERDDEGYTLQLNGETVAAKKLVVASGGLSMPGLGASPFGYKLAEQFGLK 183

Query: 189 LVETRPGLVPLTFDGKAWQSLTELAGIAL--EVEVETGAKKERGHFLEDLLFTHRGLSGP 246
           ++ TR GLVP T      + L  L+G+++   +  E G       F E+LLFTHRGLSGP
Sbjct: 184 VLPTRAGLVPFTLHKPLLEQLQVLSGVSVPSTITAENGTV-----FRENLLFTHRGLSGP 238

Query: 247 AILQISSYWKPGTPLTLNLLPQLDVAETLIDGKGT-IKKNLGNILAQWLPNRLAEGWLKI 305
           A+LQISSYW+PG  +++NLLP   + + L + +     ++L N LA  LP RL E     
Sbjct: 239 AVLQISSYWQPGEFVSINLLPDCHLDDFLDEQRAAHPNQSLKNTLAMQLPKRLVE----- 293

Query: 306 NGFDAGGRIADMPDKSLKKLG--------DSLNRWVILPSGSEGYRKAEVTLGGVDTREL 357
                  ++  +PD +LK+L         ++L  W + P+G+EGYR AEVTLGGVDT EL
Sbjct: 294 ----CLQQLGQLPDVTLKQLNVREQQALVETLTAWRVQPNGTEGYRTAEVTLGGVDTNEL 349

Query: 358 SQQTMMANKVPGLHVIGEAMDVTGWLGGYNFQWAWASGVAAGSAV 402
           S +TM A +VPGL+ IGE MDVTGWLGGYNFQWAWAS  A   A+
Sbjct: 350 SSRTMEARRVPGLYFIGEVMDVTGWLGGYNFQWAWASAWACAQAL 394