Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  291 bits (745), Expect = 3e-83
 Identities = 149/421 (35%), Positives = 249/421 (59%), Gaps = 3/421 (0%)

Query: 8   VLLFALMLTGMPISISLGLTVLTF-LFTMTEVPIQSVALKLFTGIEKFEIMAIPFFILAG 66
           +L+  L L   PI+ ++ +    F L  M  +P+ + A ++  G +   ++A+P F+LAG
Sbjct: 11  LLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAG 70

Query: 67  NFLTHGGVARRMINFATSMVGHWHGGLALAGVLACALFAAVSGSSPATVVAIGSIILPAM 126
             +   G+ RR++  A  +VGH  G LA    +   L   ++ S+ A    +   +   M
Sbjct: 71  CIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEM 130

Query: 127 VKQGFPNRFGAGVITTSGALGILIPPSIVMVMYSVSTNTSVGKLFMAGVVPGLLLAFLLG 186
            ++G+   F A + +++  +  LIPPSI +++Y     TS+G+LF AGV+PGL+LA  L 
Sbjct: 131 SQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGLM 190

Query: 187 VTTWFLARKNNYPRLKK--ATWAERAAAFRKSGWGLFLIVIVMGGIYTGVFTPTEAAAMA 244
           VTT+F+ARK  Y  L+K  AT AE   A     W L + V++  G   G+FT TEA A+ 
Sbjct: 191 VTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAVV 250

Query: 245 AVYAFFIAVFVYKDLTLKQVPKVLLDSASMSAMLLYIITNAVLFSFLVTSENIPQAMAAW 304
            VY  F+AVF Y++ T +Q+P+VL ++   SA+++ +I  A  F F +  E +PQAM+ W
Sbjct: 251 VVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGW 310

Query: 305 ITDSGLGPITFLLVVNILLLLAGNVMEPSSIVLILAPILFPVAMKLGIDPVHFGILIVVN 364
           + ++   P+  LL++N+LL++ G  +E S+ ++IL P+L P+   +GID VHFG++ + N
Sbjct: 311 LGEATDNPLLMLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITN 370

Query: 365 MEVGMCHPPVGLNLYVASGITKMGITELTIAVMPWLLTMLGFLALVTYWPALSLWLPNLI 424
           + +    PPVG  +Y++S + K+ +      V+P+L  M+  L +++ +P LSLWLPNL+
Sbjct: 371 LTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVMLSMFPQLSLWLPNLV 430

Query: 425 Y 425
           Y
Sbjct: 431 Y 431