Pairwise Alignments

Query, 220 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 241 a.a., DedA family protein from Bifidobacterium breve UCC2003

 Score =  142 bits (358), Expect = 5e-39
 Identities = 74/178 (41%), Positives = 110/178 (61%), Gaps = 7/178 (3%)

Query: 32  LFLIVFCETGLVVLPFLPGDSLLFIAGTFCA----TG--AMDIWLLMTLLVVAAVAGNTL 85
           +FLIVF ETG+V  PFLPGDSLLF AG F A    TG  A+ ++ L+ ++  A + G+  
Sbjct: 33  IFLIVFIETGVVFFPFLPGDSLLFAAGVFAAPDAATGKAALPLFWLLPVVWCAPIVGDQC 92

Query: 86  NYWIGGWVGQRVY-THNYRWLNPEALRKTHAFYEKHGGKTIVIARFTPIVRTFAPFIAGV 144
           NY+IG + G+R+  +   + L PE L KT    EK G   + + RF P +RTF PFI+G+
Sbjct: 93  NYFIGHFFGRRIIQSGKVKALTPERLAKTEHMIEKWGPLAVFLGRFFPFIRTFMPFISGI 152

Query: 145 SAMSFARFQLFNVLGAFLWVVGLVVLGYLFGNIPVVQQNLNTLVLIGIVAAVFPIVLG 202
           S M ++RF  F+V G   W     +LGY FGNIP VQ +   ++++ ++ ++ P ++G
Sbjct: 153 SGMRWSRFTPFSVAGGLCWSTLFTLLGYFFGNIPAVQDHFELVIVLILLVSLAPTIIG 210