Pairwise Alignments

Query, 360 a.a., type VI secretion protein from Herbaspirillum seropedicae SmR1

Subject, 361 a.a., type VI secretion system baseplate subunit TssG from Pantoea sp. MT58

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 25/169 (14%)

Query: 15  RLFAAPHRFQFFQAVRMIELWFKRNGVAP-----ERAVCDFLRFANRTALGFPASEIEAI 69
           RL A  HR  F++  +++E   KRN   P          D +RFA    +GFP SE++A+
Sbjct: 15  RLEADLHRINFYRLCQLLE---KRNPGGPLMGSTSHPADDPVRFAPHPGMGFPVSELKAV 71

Query: 70  DAVASSDDTSVAGMAQSLREGKMKYVRLTPTFMGFLGGSGALPAHYTERIARHQIEHRDE 129
           D   + D                    +  TFMG  G    LP  Y + I + +  H  E
Sbjct: 72  DYDEADDSRPPL---------------IRTTFMGMYGVDSPLPTTYLDDITQRREGH--E 114

Query: 130 GPRAFLDVFSTRSLALFYQAWSKYRLAFQYEMGRRDKFLPLLLSLSGIG 178
             + FLD+FS R L  FY+ W KY     +E G  D     LL L G+G
Sbjct: 115 ALQGFLDIFSHRILTQFYRIWRKYSYPATFEPGGTDTISQSLLGLVGLG 163