Pairwise Alignments

Query, 360 a.a., type VI secretion protein from Herbaspirillum seropedicae SmR1

Subject, 348 a.a., type VI secretion system baseplate subunit TssG from Pantoea sp. MT58

 Score =  115 bits (287), Expect = 2e-30
 Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 33/350 (9%)

Query: 14  ERLFAAPHRFQFFQAVRMIELWFKRNGVAPERAVCDFLRFANRTALG---FPASEIEAID 70
           +++ AAP R+  FQ +R ++                  +   R  LG    P  E   I 
Sbjct: 21  QKVMAAPWRYDLFQLLRRLDA-----------------QGGQRYPLGRAPLPKFESVRIG 63

Query: 71  AVASSDDTSVAGMAQSLREGKMKYVRLTPTFMGFLGGSGALPAHYTERIARHQIEHRDEG 130
              S         + + REG  ++  L+    G  G +G LP H TE +    + H+D  
Sbjct: 64  QTPSLAFAPATVASATPREGSERH-ELSIYSFGLFGPNGPLPTHLTEYVHERIVHHQDHS 122

Query: 131 PRAFLDVFSTRSLALFYQAWSKYRLAFQYEMGRRDKFLPLLLSLSGIGFRSLRERLLEVD 190
             AF D+F  R+  LFY+AW+  +     +     +FL  L  L+GIG  + ++      
Sbjct: 123 LSAFADLFHHRATLLFYRAWADAQPTVSLDRPDDSRFLNYLACLAGIGLPAQQQ------ 176

Query: 191 GRGVRDESIAHFAAALSHRPASAPYMQQVLSEYFSIPLTIEQFVGQWYDVPREHQTMLGS 250
              +   +       LS     A  + ++L  YF +P+ + Q +  W  +    Q  LG+
Sbjct: 177 ASSLSLHARLMLVGHLSRHGHDAEGLVRILRHYFGVPVRLTQNLPHWLTLDSRDQARLGA 236

Query: 251 TN--SALG-TAMAGQRVWQRDLRMRLRLGPLALPDFEQFLPGARASQALSRMLGVFTGPT 307
                 LG +A  G  V     R RL LGPL    +  FLP A  +Q +   +  + G  
Sbjct: 237 GRHMPRLGASAFLGVAVRDVQHRFRLHLGPLNAAQYAHFLPDAPGAQEVRDWVRHYLGIE 296

Query: 308 LEYEIQLILRAEDVRGLGLSPDRTGGRLGWDSFVATAPQQQDRADICYQL 357
           +++++ LIL A++V+G+ L       RLG+ S++   PQ  DR D  +++
Sbjct: 297 MQWDLSLILAADEVQGVALGGT---ARLGYTSWLGQMPQPHDREDFMFEV 343