Pairwise Alignments

Query, 400 a.a., ammonium transporter from Herbaspirillum seropedicae SmR1

Subject, 416 a.a., probable ammonium transporter, marine subtype from Pseudomonas stutzeri RCH2

 Score =  216 bits (549), Expect = 1e-60
 Identities = 141/408 (34%), Positives = 208/408 (50%), Gaps = 46/408 (11%)

Query: 7   GADALFILLGAIMILAMHAGFAFLELGTVRKKNQVNALVKILADFAVSTIVYFFIGYYVA 66
           G D  + ++   +++ M AGFA LE G VR KN    L K +  +++++I+Y  +GYY+ 
Sbjct: 12  GLDTFYFVICGALVMWMAAGFAMLEAGLVRAKNTAEILTKNIVLYSLASIMYLLVGYYIM 71

Query: 67  YR---------VSFFAGAE---TLAQRSGFEL------VKFFFLLTFAAAIPAIISGGIA 108
           Y          + F  G E    L    G +         FFF + FAA   +++SG +A
Sbjct: 72  YSSPEGGIFPSLGFLIGDEHAVDLVAAGGEDAPYYSARADFFFQIVFAATCMSVVSGAVA 131

Query: 109 ERSKFNPQLVATAVLVGLVYPFFEGIAWNQHLGVQAWLAATFDAE-FHDFAGSIVVHAVG 167
           ER K    +    V+ G +YP           G   W     DA  F DFAGS VVH  G
Sbjct: 132 ERMKLWAFIAFAVVMTGFIYPI---------QGFWKWGGGFLDAAGFLDFAGSGVVHMAG 182

Query: 168 GWIALPAVLLLGARRGRYSKEGAVAAHPPSNIPFLALGAWILTVGWFGFN---VMSAQTL 224
              AL  VLLLGAR+G+Y   G + A P +N+P   LGA+IL +GWFGFN    +   T+
Sbjct: 183 AAAALAGVLLLGARKGKYGPNGQINAIPGANMPLATLGAFILWMGWFGFNGGSQLKMSTI 242

Query: 225 DKMNGL--VAMNSLMAMAGGTLVA-----LLMGRNDPGFAYNGPLAGLVAVCAGSDLMHP 277
           +  N +  V +N+ M  AGG + A     LL G++D     NG LAGLVA+ A       
Sbjct: 243 EDANAVAQVFVNTNMGAAGGLIAALITARLLFGKSDLTMVLNGALAGLVAITAEPLTPSA 302

Query: 278 LGALVTGGIAGAIFVWMFTRTQNKWKIDDVLGVWPLHGLCGLWGGLAAGIFGLQALGGRG 337
           L A + GG+ G + V+      +K K+DD +G   +HG+ G+WG LA  +    A     
Sbjct: 303 LQATLIGGVGGVLVVFSILGL-DKLKLDDPVGAISVHGVAGMWGLLAVPLTNADA----- 356

Query: 338 GVSFLSQLIGSVMGIVIAALGGWIVYGLLKKAVGIRLDPEQEFEGADL 385
             +F +QL+G V   +   +   IV+G++K  +G+R+  E+E+EG D+
Sbjct: 357 --TFGAQLLGLVSIFLWVFIASLIVWGIIKAVMGLRVSEEEEYEGVDV 402