Pairwise Alignments

Query, 400 a.a., ammonium transporter from Herbaspirillum seropedicae SmR1

Subject, 402 a.a., Ammonia permease from Pseudomonas stutzeri RCH2

 Score =  565 bits (1457), Expect = e-166
 Identities = 272/390 (69%), Positives = 324/390 (83%), Gaps = 1/390 (0%)

Query: 6   NGADALFILLGAIMILAMHAGFAFLELGTVRKKNQVNALVKILADFAVSTIVYFFIGYYV 65
           +G++ LFIL+GA+M+LAMHAGFAFLE+GTVR KNQVNAL KI+ DFAVST+ YFFIGY+V
Sbjct: 13  HGSNTLFILIGAVMVLAMHAGFAFLEVGTVRLKNQVNALSKIITDFAVSTLAYFFIGYWV 72

Query: 66  AYRVSFFAGAETLAQRSGFELVKFFFLLTFAAAIPAIISGGIAERSKFNPQLVATAVLVG 125
           AY V+F   A+ L    G+ LVKFFFLLTFAAAIPAIISGGIAER++F PQL AT ++V 
Sbjct: 73  AYGVTFMQPADQLVLDHGYALVKFFFLLTFAAAIPAIISGGIAERARFGPQLCATLLIVA 132

Query: 126 LVYPFFEGIAWNQHLGVQAWLAATFDAEFHDFAGSIVVHAVGGWIALPAVLLLGARRGRY 185
            VYPFFEG+ WN + G QAWL   F A FHDFAGS+VVHA+GGW+A  AV+LLG R GRY
Sbjct: 133 FVYPFFEGLIWNGNFGFQAWLEYQFGASFHDFAGSVVVHAMGGWLAFGAVILLGRRNGRY 192

Query: 186 SKEGAVAAHPPSNIPFLALGAWILTVGWFGFNVMSAQTLDKMNGLVAMNSLMAMAGGTLV 245
            ++G + A  PSNIPFLALG+WIL VGWFGFNVMSAQ+++ ++GLVA+NSLMAM GGT  
Sbjct: 193 -RDGRLVAFAPSNIPFLALGSWILIVGWFGFNVMSAQSIEGISGLVAVNSLMAMVGGTAA 251

Query: 246 ALLMGRNDPGFAYNGPLAGLVAVCAGSDLMHPLGALVTGGIAGAIFVWMFTRTQNKWKID 305
           A L GRNDPGF +NGPLAGLVAVCAGSDLMHP+GAL TG IAGA+FVW FT TQN+WKID
Sbjct: 252 AWLAGRNDPGFLHNGPLAGLVAVCAGSDLMHPVGALATGAIAGALFVWAFTATQNRWKID 311

Query: 306 DVLGVWPLHGLCGLWGGLAAGIFGLQALGGRGGVSFLSQLIGSVMGIVIAALGGWIVYGL 365
           DVLGVWPLHGLCG+WGG+A GIFG  ALGG GGVS +SQ+IGS +G+++A LGG+ VYGL
Sbjct: 312 DVLGVWPLHGLCGIWGGVACGIFGQAALGGLGGVSLISQVIGSGLGMLVALLGGFGVYGL 371

Query: 366 LKKAVGIRLDPEQEFEGADLAIHKISSTAE 395
           LK   GIRL  E+EF GADL+IH+I + ++
Sbjct: 372 LKLTTGIRLSQEEEFNGADLSIHRIGALSQ 401