Pairwise Alignments

Query, 400 a.a., ammonium transporter from Herbaspirillum seropedicae SmR1

Subject, 416 a.a., Rh-like protein/ammonium transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (433), Expect = 4e-47
 Identities = 134/396 (33%), Positives = 190/396 (47%), Gaps = 37/396 (9%)

Query: 9   DALFILLGAIMILAMHAGFAFLELGTVRKKNQVNALVKILADFAVSTIVYFFIGYYVAY- 67
           D  + L+   +++ M AGFA LE G VR KN    L K +  ++++ I Y  +GY + Y 
Sbjct: 19  DTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVCLYSIACITYLIVGYNIMYV 78

Query: 68  -------RVSFFAGAETLAQRSGFELVK-FFFLLTFAAAIPAIISGGIAERSKFNPQLVA 119
                    SF     T A  +   L   FFF + F A   +I+SG +AER K    L  
Sbjct: 79  DNPEAGWLPSFGTLIGTQAADADHSLESDFFFQVVFVATSMSIVSGAVAERMKLWAFLAF 138

Query: 120 TAVLVGLVYPFFEGIAWNQHLGVQAWLAATFDAEFHDFAGSIVVHAVGGWIALPAVLLLG 179
           + V+  ++YP      W        +++A   A F DFAGS +VH  G   AL  V+LLG
Sbjct: 139 SVVMTAVIYPVEGFWTWGG-----GFVSA---AGFVDFAGSGIVHMAGAAAALSGVILLG 190

Query: 180 ARRGRYSKEGAVAAHPPSNIPFLALGAWILTVGWFGFNVMS-AQTLDKMN----GLVAMN 234
           AR+G+Y   G V   P SN+P   LG +IL +GWFGFN  S     D  N    G + +N
Sbjct: 191 ARKGKYGPSGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANAASVGKIFVN 250

Query: 235 SLMAMAGGTLVALLM-----GRNDPGFAYNGPLAGLVAVCAGSDLMHPLGALVTGGIAGA 289
           +  A A G + AL++     G+ D     NG LAGLVA+ A         A   G +AGA
Sbjct: 251 TNSAAAFGAISALVVCKMIWGKADLTMILNGALAGLVAITADPLSPSLEFAAAIGLLAGA 310

Query: 290 IFVWMFTRTQNKWKIDDVLGVWPLHGLCGLWGGLAAGIFGLQA-LGGRGGVSFLSQLIGS 348
           + V+      ++ KIDD +G   +HG+ G+ G L        A LGG        QL G 
Sbjct: 311 LVVFSIVGF-DRIKIDDPVGAISVHGVAGVLGLLLVPASNADATLGG--------QLFGI 361

Query: 349 VMGIVIAALGGWIVYGLLKKAVGIRLDPEQEFEGAD 384
                      ++V+ +LK  +GIR+  E+E+ G D
Sbjct: 362 CAIFAWTFGASFLVWFVLKVTMGIRVSEEEEYNGMD 397