Pairwise Alignments

Query, 400 a.a., ammonium transporter from Herbaspirillum seropedicae SmR1

Subject, 437 a.a., ammonium transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  198 bits (503), Expect = 3e-55
 Identities = 139/400 (34%), Positives = 197/400 (49%), Gaps = 43/400 (10%)

Query: 11  LFILLGAIMILAMHAGFAFLELGTVRKKNQVNALVKILADFAVSTIVYFFIGYYVAYRVS 70
           L   +   ++  M  GFA LE G VR KN    + K +A ++++ ++Y+ IG+ + Y   
Sbjct: 40  LLFCMAGFLVFFMACGFAMLEGGLVRSKNVTMQMTKNIALYSIAAVMYWLIGFNLMYPGD 99

Query: 71  F--FAGA---ETLAQRSGFELVK-----------FFFLLTFAAAIPAIISGGIAERSKFN 114
           F  + G+    T+    G                FFF L F AA  +I+SG +AER K  
Sbjct: 100 FNGYVGSFFVPTVLDPVGVAAADAALDYASIGSDFFFQLVFVAATASIVSGALAERIKLW 159

Query: 115 PQLVATAVLVGLVYPFFEGIAWNQHLGVQAWLAATFDAEFHDFAGSIVVHAVGGWIALPA 174
           P L    VL G++YP      W        WL+   +  F DFAGS VVH+VGGW AL  
Sbjct: 160 PFLAFVVVLTGIMYPISGSWQWGG-----GWLS---EMGFSDFAGSTVVHSVGGWAALAG 211

Query: 175 VLLLGARRGRYSKEGAVAAHPPSNIPFLALGAWILTVGWFGFNVMSAQTLDKMNGL---- 230
            ++LG R G+Y K+G V   P SN+    LG +IL +GWFGFN  S   +  +  +    
Sbjct: 212 AIILGPRLGKY-KDGRVNPMPGSNLALATLGTFILWLGWFGFNGGSQLAMGTVGDVSDVS 270

Query: 231 -VAMNSLMAMAGGTLVALLM-----GRNDPGFAYNGPLAGLVAVCAGSDLMHPLGALVTG 284
            +  N+ MA A G L AL++      + D     NG LAGLV++ A        GAL  G
Sbjct: 271 RIFANTNMAAAAGALTALILTQVLYKKPDLTMVLNGALAGLVSITASPLDPTLFGALWIG 330

Query: 285 GIAGAIFVWMFTRTQNKWKIDDVLGVWPLHGLCGLWGGLAAGIFGLQALGGRGGVSFLSQ 344
            + G I V+      +K+KIDDV+G  P+H   G+WG +A   +       + G S ++Q
Sbjct: 331 AVGGVIVVFT-VPLLDKFKIDDVVGAIPVHLFAGIWGTIAVVFY-------QEGASLVTQ 382

Query: 345 LIGSVMGIVIAALGGWIVYGLLKKAVGIRLDPEQEFEGAD 384
           L+G     V     G IV+ LLK  +GIR+  E E  G D
Sbjct: 383 LVGIAAYGVFTFGVGLIVWYLLKLTMGIRVSEEDEINGLD 422