Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 629 a.a., ATP-dependent DNA helicase RecQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  570 bits (1470), Expect = e-167
 Identities = 303/609 (49%), Positives = 394/609 (64%), Gaps = 13/609 (2%)

Query: 9   ADAPPQERALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLR 68
           ADA   + A  +L  ++G+  FR  Q  I++ V GG D L +MPTG GKSLCYQ+PAL+R
Sbjct: 23  ADAVSADPARVLLADIWGFKDFRPGQEAIIRAVLGGEDVLAVMPTGSGKSLCYQLPALMR 82

Query: 69  QGTGVVISPLIALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLDLLYVAPE 128
           QG  +V+SPLIALM+DQV  LD +GV A  LNS+   D   ++   LR G L LLYVAPE
Sbjct: 83  QGVTLVVSPLIALMRDQVAQLDALGVAAGALNSSIDMDGYRRVMDGLRGGRLKLLYVAPE 142

Query: 129 RLMTPRCLDLLESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATA 188
           RL  P  L LL  + ++  AIDEAHCVSQWGHDFRP+Y+ L  + E    V  +A TATA
Sbjct: 143 RLARPDTLSLLRDSGVTALAIDEAHCVSQWGHDFRPDYLCLGKVREDLGGVQTVAFTATA 202

Query: 189 DQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPEDAGIVYC 248
           D  TR++I  RL     R F+  FDRPN+R  +  K + R+++ +F+ + H  ++G++YC
Sbjct: 203 DAATRDDIAGRLFPAPPRLFIGGFDRPNLRLAMRPKGDTRRRMFEFVAA-HTGESGVIYC 261

Query: 249 LSRKKVEETADFLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGMGIDKP 308
            SR + EE A+ LR  G  AL YHAG+D   R ANQ  FL ED +VMVAT+AFGMGIDKP
Sbjct: 262 GSRARTEELAEGLRGAGHRALPYHAGLDKPVRDANQDAFLAEDGLVMVATVAFGMGIDKP 321

Query: 309 DVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDESDADETFKR 368
           DVRFVCH D+P+S+E YYQE GRAGRDGL AD    YGL DV   R  I+ES A +  KR
Sbjct: 322 DVRFVCHADMPRSIEAYYQEIGRAGRDGLAADTLTFYGLDDVRLHRMRIEESQAGDEQKR 381

Query: 369 VLGTKLNAMLALCETLHCRRVHLLDYFGEKSAPCGNCDTCLTPPVSFDATVEVQKLLSTV 428
           V   +LNA+LALCE   CRR  LL YFGE++ PCGNCD C+    SFD T+E QK +S +
Sbjct: 382 VEIQRLNALLALCEAPRCRRQTLLGYFGERTEPCGNCDLCINGVESFDGTIEAQKAMSAM 441

Query: 429 YRVEQRFAPGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQVIALGLLT 488
            R  QRFA  H+I +L G   + + Q+ HD+L  FGVG D     WR+I RQ+ A GL++
Sbjct: 442 LRTGQRFATEHLINILVGTQTDAITQYGHDKLPTFGVGKDHTRNVWRSIFRQISAGGLIS 501

Query: 489 VDADNYSALKLTEAARPVLRGEQAVQLR--------RYQKPEKAKRSSQRSSFVETDLST 540
           +D  N+    +TEA R VLRG+  V LR        R ++ +K +R+S  +  +E D   
Sbjct: 502 LDIANHGRWLMTEAGRAVLRGQAGVALRSDVLEAAGRGERKDKERRASAPAVQLEAD--- 558

Query: 541 EEQALFEKLRWWRVETARAHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLET 600
            ++ALF+ LR  R E ARA NVPAYV+F D T+ E+A  RP SLD +R + G+G+ KL  
Sbjct: 559 -DRALFDALRAKRQELARAENVPAYVVFADRTLIELATKRPPSLDAMREIHGIGQSKLAR 617

Query: 601 YGAQIIALI 609
           YGA  + +I
Sbjct: 618 YGAAFLEVI 626