Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 637 a.a., DNA helicase RecQ from Ralstonia sp. UNC404CL21Col

 Score =  763 bits (1971), Expect = 0.0
 Identities = 398/620 (64%), Positives = 465/620 (75%), Gaps = 18/620 (2%)

Query: 6   SLPADAPPQERALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPA 65
           +LP D      A  VL  VFGYS+FRG Q EIV HVA GGD LVLMPTGGGKSLCYQ+PA
Sbjct: 13  ALPEDTAAATHA--VLHDVFGYSAFRGPQAEIVAHVADGGDCLVLMPTGGGKSLCYQIPA 70

Query: 66  LLR----QGTGVVISPLIALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLD 121
           L+R    QG G+V+SPLIALMQDQV AL+E GVRAA+LNS  +  EA Q+ER L  G LD
Sbjct: 71  LVRHRRGQGAGIVVSPLIALMQDQVAALEEAGVRAAYLNSALTGAEAAQVERDLAAGRLD 130

Query: 122 LLYVAPERLMTPRCLDLLESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPR 181
           L+YVAPERLMTPR L+LLE +RI LFAIDEAHCVSQWGHDFRPEYI+LSVLHERFP VPR
Sbjct: 131 LVYVAPERLMTPRFLELLERSRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPHVPR 190

Query: 182 IALTATADQQTREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPE 241
           IALTATAD  TR+EI+ RL L DAR F+SSFDRPNIRY IVEK + R+QLL FI++EH +
Sbjct: 191 IALTATADAVTRDEIVERLALTDARVFLSSFDRPNIRYTIVEKDSARQQLLRFIRAEHMD 250

Query: 242 ----DAGIVYCLSRKKVEETADFLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVA 297
               DAGIVYCLSRKKVEETA +L  +GI AL YHAGMD   R  +QA F +E+ +VMVA
Sbjct: 251 GDTCDAGIVYCLSRKKVEETAQWLAEQGIRALPYHAGMDSEVRARHQAIFRKEEGVVMVA 310

Query: 298 TIAFGMGIDKPDVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMI 357
           TIAFGMGIDKPDVRFV HLDLPKS+EGYYQETGRAGRDGLPA+AWMAYGL DVVQQRRMI
Sbjct: 311 TIAFGMGIDKPDVRFVAHLDLPKSLEGYYQETGRAGRDGLPANAWMAYGLADVVQQRRMI 370

Query: 358 DESDADETFKRVLGTKLNAMLALCETLHCRRVHLLDYFGEKSAPCGNCDTCLTPPVSFDA 417
           DESDAD+  KRV   KL A+L LCE   CRRV LL YFGE S PCGNCDTCLTPP ++DA
Sbjct: 371 DESDADDVHKRVSTAKLEALLGLCEAATCRRVALLAYFGESSQPCGNCDTCLTPPQTWDA 430

Query: 418 TVEVQKLLSTVYRVEQ----RFAPGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAE 473
           T E Q  LS  YRV+Q     F  G +I++LRG   ER+KQW H+ LS FG+GSD  EA 
Sbjct: 431 TREAQMALSCAYRVQQASRVSFGAGQLIDILRGNATERIKQWHHETLSTFGIGSDLSEAA 490

Query: 474 WRAILRQVIALGLLTVDADNYSALKLTEAARPVLRGEQAVQLRRYQKPEKAKRSS----Q 529
           WR++ RQ++A GL  VD   + AL LT+AARPVL+GEQ V LRR  +  +   SS    +
Sbjct: 491 WRSVFRQLVAQGLFAVDHGGHGALILTDAARPVLKGEQPVILRRQAEKVRGASSSSTKKE 550

Query: 530 RSSFVETDLSTEEQALFEKLRWWRVETARAHNVPAYVIFHDATMREIAKARPQSLDDLRH 589
           R +    +LSTE Q  ++ LR WR + AR H+VPAYVIFHDAT+  IA+  P S + L  
Sbjct: 551 RRADPAAELSTEAQVRWQALRAWRTQAAREHSVPAYVIFHDATLARIAETDPDSREALGE 610

Query: 590 VTGVGEKKLETYGAQIIALI 609
           + G+G  KL+ YG  ++ ++
Sbjct: 611 LPGIGMAKLDRYGQALLDVL 630