Pairwise Alignments

Query, 618 a.a., ATP-dependent DNA helicase RecQ from Herbaspirillum seropedicae SmR1

Subject, 615 a.a., ATP-dependent DNA helicase RecQ from Burkholderia phytofirmans PsJN

 Score =  788 bits (2036), Expect = 0.0
 Identities = 396/611 (64%), Positives = 481/611 (78%), Gaps = 16/611 (2%)

Query: 16  RALHVLETVFGYSSFRGHQGEIVQHVAGGGDALVLMPTGGGKSLCYQVPALLRQ----GT 71
           R L +L  VFGY +FRG QGEIV+HVAGGGD LVLMPTGGGKSLCYQ+P+L+R+    GT
Sbjct: 3   RPLEILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRREGGFGT 62

Query: 72  GVVISPLIALMQDQVDALDEVGVRAAFLNSTQSFDEAMQIERRLRQGDLDLLYVAPERLM 131
           G+V+SPLIALMQDQV AL EVGVRAA+LNST S  EAM  ER LR GD+DLLYVAPERLM
Sbjct: 63  GIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALRDGDIDLLYVAPERLM 122

Query: 132 TPRCLDLLESARISLFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPQVPRIALTATADQQ 191
           TPR  +LLE  RI LFAIDEAHCVSQWGHDFRPEYI+LSVLHERFP VPRIALTATAD  
Sbjct: 123 TPRFQELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATADDI 182

Query: 192 TREEIIHRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFIKSEHPE-----DAGIV 246
           TR+EIIHRL L+DAR FVSSFDRPNIRY+IVEK N R QLLDFI++EH +     DAG+V
Sbjct: 183 TRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHSKPDGTTDAGVV 242

Query: 247 YCLSRKKVEETADFLRSEGINALAYHAGMDYAQRTANQARFLREDKIVMVATIAFGMGID 306
           YCLSR+KVEETA++L+ +G++AL YHAGM++  R  +Q  F RE+ IVM ATIAFGMGID
Sbjct: 243 YCLSRRKVEETAEWLKEKGMSALPYHAGMEFEIRQKHQEMFQREEGIVMCATIAFGMGID 302

Query: 307 KPDVRFVCHLDLPKSVEGYYQETGRAGRDGLPADAWMAYGLQDVVQQRRMIDESDADETF 366
           KPDVRFV HLDLPKSVEGYYQETGRAGRDG+PA+AWMAYGL DVVQQR+MIDESDAD+  
Sbjct: 303 KPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADDAH 362

Query: 367 KRVLGTKLNAMLALCETLHCRRVHLLDYFGEKSAPCGNCDTCLTPPVSFDATVEVQKLLS 426
           KRV   KL+A+L LCE   CRRV LL YFGE S PCGNCD CL PP ++DAT E +  LS
Sbjct: 363 KRVQTGKLDALLGLCEAATCRRVRLLGYFGESSKPCGNCDNCLEPPDTWDATREARMALS 422

Query: 427 TVYRVEQ----RFAPGHVIEVLRGIDGERVKQWRHDQLSVFGVGSDRGEAEWRAILRQVI 482
            V+R ++     F  GH+I++LRG   E++ Q  H++L+ FG+GS  GE EWRA+ RQ++
Sbjct: 423 CVFRAQRASGFHFGAGHLIDILRGNSSEKILQRGHEKLTTFGIGSALGEQEWRAVFRQLV 482

Query: 483 ALGLLTVDADNYSALKLTEAARPVLRGEQAVQLRRYQKPEKAKRSSQRSS---FVETDLS 539
           A G LTVD + + +L LTEA++PVL+GEQ V +RRY KP + ++SS R+S        + 
Sbjct: 483 AFGYLTVDHEGFGSLVLTEASKPVLKGEQNVTMRRYVKPTRTRQSSGRTSERADPTIGMG 542

Query: 540 TEEQALFEKLRWWRVETARAHNVPAYVIFHDATMREIAKARPQSLDDLRHVTGVGEKKLE 599
             E+A +E+LR WR ETA++  VPAYVIFHDAT+ EIA+  P S+DDLR + G+G +KL+
Sbjct: 543 PRERARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIDDLRGIPGMGARKLD 602

Query: 600 TYGAQIIALIA 610
            +G +++ ++A
Sbjct: 603 RFGDELLEVVA 613