Pairwise Alignments

Query, 165 a.a., transcriptional activator from Herbaspirillum seropedicae SmR1

Subject, 162 a.a., transcription/translation regulatory transformer protein RfaH from Klebsiella michiganensis M5al

 Score = 93.6 bits (231), Expect = 1e-24
 Identities = 59/164 (35%), Positives = 86/164 (52%), Gaps = 7/164 (4%)

Query: 3   WYLVHTKPRQEVCAQQNLEQQGYECYLPLLHKEKVRRGALTLSSEALFPRYLFIRLGAGL 62
           WYL++ K  Q   AQ++LE+Q   C +P +  EK+ RG  T  SE LFP YLFI     +
Sbjct: 4   WYLLYCKRGQLERAQEHLERQAVNCLMPTIELEKIVRGKRTTVSEPLFPNYLFIEFDPEV 63

Query: 63  TSKSWAPIRSTKGVSRLVTFGTEPAKISNDLVLALQAAQQSEAAPVERAFTP--GQRVQL 120
              +   I +T+GV+  V FG  PA + + ++  L   +       E   TP  G  V +
Sbjct: 64  IHTT--TISATRGVNSFVRFGALPAIVPSAVIHQLSIYKPEGITDPE---TPHEGDSVLI 118

Query: 121 VEGALSGIEGIFLEADGERRVMVLIEMLSKPVSVAVAPGSLRKI 164
            +GA  G++ IF E DGE R M+L+ +L+K V  +V      KI
Sbjct: 119 TDGAFEGLQAIFTEPDGEARSMLLLNLLNKQVLQSVKNTDFYKI 162