Pairwise Alignments

Query, 402 a.a., hemolysin D from Herbaspirillum seropedicae SmR1

Subject, 385 a.a., antibiotic transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  352 bits (903), Expect = e-101
 Identities = 196/389 (50%), Positives = 261/389 (67%), Gaps = 21/389 (5%)

Query: 8   TRLTMTVAIAAALVACGQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVEAFRVAQV 67
           T L   +A+A+ L  C ++ AA   P  P +V VVT+  Q   +T+ELPGR  AFRVA+V
Sbjct: 8   TALVTAIALASLLSGCKKEEAAPAPP--PPQVGVVTLKTQPFTLTSELPGRTSAFRVAEV 65

Query: 68  RARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQTTLTAQR 127
           R +V GI+ KR+FKEG++VK GQ L++IDPA Y+A+L+SA+A       NL  T   A R
Sbjct: 66  RPQVNGIILKRLFKEGADVKAGQQLYQIDPAVYEATLKSAEA-------NLRSTKSIADR 118

Query: 128 YKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISGRIGRAL 187
           YK LV+  AVS+QEYD AVA + ++EA++       QTA +N+ Y  V +PISGRIGR+ 
Sbjct: 119 YKQLVDEQAVSRQEYDTAVANRLESEANL-------QTAQINVRYTKVYAPISGRIGRSS 171

Query: 188 VTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNKASVTLE 247
           VTEGALV  G A  LA +QQLDP+YV+VTQSS +LL+L++ + +G+L+  G+N A V L 
Sbjct: 172 VTEGALVSNGQADALATIQQLDPIYVDVTQSSVELLQLRRELESGRLQKAGENAAMVKLT 231

Query: 248 LENGQAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAVDEQALL 307
           LE+G  YP  GKL FS++SVD+ TGSV+LRA FPNP   LLPG +V A+++  V+  A+L
Sbjct: 232 LEDGSQYPHEGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQAGVNSAAIL 291

Query: 308 VPQQAVVRD-AGGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVEGLQKV 366
            PQQ V RD  G  T +VV A+NKVE R +K     G+ W + DGLK GDR+I EGLQ V
Sbjct: 292 APQQGVTRDLKGAPTALVVGADNKVELRQLKASRTVGSQWLIEDGLKAGDRLITEGLQFV 351

Query: 367 RPGATVKPVQWNPAG----APAQASGQPA 391
           RPG  VK  +    G    APA+A+ + A
Sbjct: 352 RPGVEVKATEATNVGTKNPAPAKAADKAA 380