Pairwise Alignments

Query, 402 a.a., hemolysin D from Herbaspirillum seropedicae SmR1

Subject, 426 a.a., Secretion protein HlyD (NCBI) from Rhodospirillum rubrum S1H

 Score =  347 bits (890), Expect = e-100
 Identities = 193/391 (49%), Positives = 256/391 (65%), Gaps = 8/391 (2%)

Query: 7   FTRLTMTVAIAAALVACGQKPAAQ--GGPMPPSEVSVVTIAPQRVAITNELPGRVEAFRV 64
           F RL  T A++A L +C  +   Q  GG  P  EV+V+T APQ + IT  LPGR  A+R 
Sbjct: 34  FLRLMTTAALSAVLWSCDSQEGGQAAGGARPAPEVTVITAAPQTLRITERLPGRTVAYRS 93

Query: 65  AQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQTTLT 124
           A+VR +V GI+ KR+F+EG+EV EGQ L++IDPA YKA+L+SA+A LA+A A +      
Sbjct: 94  AEVRPQVNGIILKRLFEEGTEVTEGQQLYQIDPATYKAALDSAKAQLAKADATVKSARAK 153

Query: 125 AQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISGRIG 184
           A RY  LV++ AVS+Q+YD+  A   ++ A VA  +A V  A +NL Y  VT+PISGRIG
Sbjct: 154 AARYGELVKLKAVSRQDYDDVTATLAESVASVADAQATVDAAEINLAYTRVTAPISGRIG 213

Query: 185 RALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNKASV 244
           R+ VTEGALV    AT LA + QLDP+ V++TQSS  LLKL+  MA G +++    +  V
Sbjct: 214 RSAVTEGALVTANQATTLATITQLDPINVDLTQSSDKLLKLRAQMANGTVQA--PERVPV 271

Query: 245 TLELEN-GQAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAVDE 303
           TL+++N G  Y L G L FS++ VDE TG+V LRA FPNP R+LLPG +VRA ++    E
Sbjct: 272 TLQIDNSGTPYGLTGTLQFSEVVVDETTGTVRLRATFPNPNRILLPGLFVRATVDFGSRE 331

Query: 304 QALLVPQQAVVRDAGGSTVM-VVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVEG 362
              L+PQ+AVVRDA G   + V+   +K E RPV     +G NW V +GLK G+R+++ G
Sbjct: 332 NVFLIPQRAVVRDASGKAALWVIGDGDKAERRPVTAETTQGTNWVVTEGLKGGERIVIAG 391

Query: 363 LQKVRPGATVKPVQWNPAGAPA--QASGQPA 391
           LQ + PGA VK V   PAG  A   A GQPA
Sbjct: 392 LQSMAPGAQVKAVAAPPAGQEAGQPAGGQPA 422