Pairwise Alignments

Query, 291 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 329 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  151 bits (381), Expect = 2e-41
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 22/307 (7%)

Query: 2   DINALVDFQLVAAHGSFGRASRESGRAKATLSRRVAELEEELGVRLVERGTQRLTVTEAG 61
           ++N L+ F  V  HG F  A R  G +K+ LSRR+ ELE  LGVRL++R T++L +TEAG
Sbjct: 7   NLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEASLGVRLLQRSTRKLALTEAG 66

Query: 62  ELLLQRSEGPLRELAEAMTQAREGSSAPRGRLRIAAPLVFSQLALGRLAASFHAAYPQVE 121
           +L  Q  +  L E   A+   ++  S+PRG +R++ P+  SQ  L ++   F   YP+V 
Sbjct: 67  QLFYQHCQAMLSEAQAAVNVVQQLRSSPRGTVRVSVPVTVSQTILSQILPEFMHRYPEVR 126

Query: 122 VDVVAEDRLVDLVQEHFDLCIRI--NPSDDGNLVGRCFARDSLALVAAPTLPMPRARAGK 179
           V +   +R+VDL ++  D+ +R+  +P ++ N+V R   R    LV AP+L    A    
Sbjct: 127 VVMRVTNRVVDLFEDSIDVALRVRSDPPENANIVVRPLWRTQQMLVGAPSLLQQNA---- 182

Query: 180 SHPVPAVVMPTFRDSDL--WSLREGKLLIAP---------QPVLRLSSLMMVKDAVCAGA 228
             P+    +  F   D+     R    LIAP         +P L  + LM +++AV AG 
Sbjct: 183 -PPLLPADLNGFETLDVPTGDGRHVYNLIAPDGTRHAHEHEPRLVTADLMTIREAVLAGV 241

Query: 229 GAALLPWSLASALVEAGQLK--LWGKLGGEVELWVLHTSRRLQSPKVRAFVDFMCRQY-- 284
           G A LP  +  A + AGQL   + G      +L+ +  SR+   P VRAFVD++      
Sbjct: 242 GIAALPEMMYGAALRAGQLSPVMPGWTFPTPQLYAVFVSRQGMVPAVRAFVDYLVEMLDP 301

Query: 285 PDGRFVV 291
            DG++++
Sbjct: 302 DDGKYIM 308



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 118 PQVEVDVVAEDRLVDLVQEHFDLCIRINPSDDGN-LVGRCFARDSLALVAAP 168
           PQ+    V+   +V  V+   D  + +   DDG  ++G C AR+    VA P
Sbjct: 272 PQLYAVFVSRQGMVPAVRAFVDYLVEMLDPDDGKYIMGECPAREEKVAVAQP 323