Pairwise Alignments

Query, 311 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 288 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  140 bits (353), Expect = 4e-38
 Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 9/278 (3%)

Query: 41  FLAPACVMTLVYVLYPILYTIYLSFFSWDGMTEPRFVGLANYVELFHAPTFYTALKNNVL 100
           FLAPA V  + + L+PI+ TI+ SF+ W+G+    F+G+ NY+ +F  P  Y ++ ++  
Sbjct: 10  FLAPALVFYIAFELWPIIQTIWYSFYEWNGIDASTFIGVENYITVFTDPDLYGSILHSFY 69

Query: 101 WLLMFLLAP-PMGLAIALYLN--QKVIGMRVVKSLFFAPFVLSGVVVGLMYSWFYDPSFG 157
            ++ F + P  +GL IA+ +   +  +G    +   F P V+ G   G+ ++W       
Sbjct: 70  LIIFFSIIPIVLGLIIAVLIKDMKSKVGRSFAQVCLFLPRVIPGAAAGVAWTWMLADKGT 129

Query: 158 LLSLLFGQGVPV-----LGDARYATFGIIFAALWPQTAYCMILFLTGLTALNHDQVEAAR 212
              LL   G+       LGD   +   +     W Q  +C++L L+G+  ++    EAA 
Sbjct: 130 ANQLLRAVGLGDFAHVWLGDQSTSLNAVGVIGFWLQLGFCVVLLLSGIGGIDQSLYEAAS 189

Query: 213 MEGAKGWTMLRYVILPQLRSTTFMAFVVSIIGALRSFDLISVMTSGGPYESSTVLAYYAY 272
           ++GA  W  L  + LP LR    +   ++II AL SFD++ + T GGP  S+ V     Y
Sbjct: 190 LDGAGWWRQLFSITLPGLRGQIGVCLTMTIISALASFDVVYMSTQGGPGTSTMVPGVQVY 249

Query: 273 DQAIKYYRQGYSAAVAVTLFAIMLVYIVYQLRRMLRAE 310
             A      G ++A+AVTL  I+++ +V  L+R++  +
Sbjct: 250 RLAFTQQSVGLASALAVTLM-ILVLLVVGPLQRLVNGK 286