Pairwise Alignments

Query, 311 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 314 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  135 bits (339), Expect = 2e-36
 Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 13/276 (4%)

Query: 32  ARRNRAA--FWFLAPACVMTLVYVLYPILYTIYLSFFSWDGMTEPRFVGLANYVELFHAP 89
           A+ N+ A  + F+ P  +  LV+ L P++ +  +SFF W     P+F GL NY+E+F   
Sbjct: 5   AKVNKRAWPYLFILPWIIGFLVFTLGPLVLSFVMSFFDWSITGTPKFRGLGNYIEMF--T 62

Query: 90  TFYTALKNNVLWLLMFLLAPPMGLAIALYL----NQKVIGMRVVKSLFFAPFVLSGVVVG 145
           T   ALK+  + L    +  P+ + IAL L    +Q V G +  +++F+ P V+SGV V 
Sbjct: 63  TDDQALKSLSISLKYAAIFVPLNMIIALVLAMLISQPVKGAKFFRTIFYIPAVISGVAVS 122

Query: 146 LMYSWFYDPSFG----LLSLLFGQGVPVLGDARYATFGIIFAALWPQTAYCMILFLTGLT 201
           +++ W  + ++G    LLSLL   G   L D ++A   +IFA+ +      M++F T + 
Sbjct: 123 IIFGWLLNGNYGVINYLLSLLGIDGPQWLVDPKWAIIAVIFASAFG-VGSMMLIFYTDIK 181

Query: 202 ALNHDQVEAARMEGAKGWTMLRYVILPQLRSTTFMAFVVSIIGALRSFDLISVMTSGGPY 261
            +  D  EAA ++GA        + LP +  T     + SII + +   L+ ++T+GGP 
Sbjct: 182 NIPIDLYEAAAIDGAGPARQFFSITLPMITPTILFNLITSIISSFQQVTLVMLLTNGGPM 241

Query: 262 ESSTVLAYYAYDQAIKYYRQGYSAAVAVTLFAIMLV 297
           +S+       Y+ A K+++ GY++A A  +F I+L+
Sbjct: 242 KSTYFYGLMTYNNAFKFHKLGYASANAWVMFIIILL 277