Pairwise Alignments

Query, 241 a.a., L-proline ABC transporter, ATPase component 2 (from data) from Herbaspirillum seropedicae SmR1

Subject, 234 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

 Score =  265 bits (676), Expect = 8e-76
 Identities = 136/235 (57%), Positives = 178/235 (75%), Gaps = 2/235 (0%)

Query: 5   ILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAGKTTTLKAITGTLPASRVEGHI 64
           +L+++ L V+YG I AVKGI L+V++GE+V+LIGANGAGKTTTL  ITG +PA    G I
Sbjct: 1   MLEIKDLCVSYGAIDAVKGISLKVDDGEIVSLIGANGAGKTTTLHTITGLVPAK--SGSI 58

Query: 65  EYLGQPLKGKKSFELVKDKLAMVPEGRGVFTRMSIQENLLMGAYTSDDKGQIAADIDKWF 124
            Y G  L    + ++V   +A VPEGR VFTRMS+QENL MGA++  D+  +  D++  F
Sbjct: 59  TYDGHDLLKTHANKIVTLGMAHVPEGRHVFTRMSVQENLEMGAFSLKDQSNLGKDLEMVF 118

Query: 125 AVFPRLKERAAQMAGTLSGGEQQMLAMARALMSHPKLLLLDEPSMGLSPIMVEKIFEVIR 184
             FPRLKER  Q+AGTLSGGEQQM+AM RALMSHPK +L+DEPSMGLSP++V++IF++I 
Sbjct: 119 DYFPRLKERRRQLAGTLSGGEQQMVAMGRALMSHPKTILMDEPSMGLSPLLVKEIFDIIV 178

Query: 185 NVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLG 239
            +   GIT+LLVEQNAK+AL  A R YV+E+G ITM+G+A  +L D +V+ AYLG
Sbjct: 179 TLRKSGITVLLVEQNAKMALSIADRAYVLETGKITMEGKASDLLHDEKVRKAYLG 233