Pairwise Alignments

Query, 255 a.a., L-proline ABC transporter, ATPase component 1 (from data) from Herbaspirillum seropedicae SmR1

Subject, 287 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

 Score =  228 bits (582), Expect = 8e-65
 Identities = 124/253 (49%), Positives = 165/253 (65%), Gaps = 1/253 (0%)

Query: 2   SQTLLKIRDVSKRFGGLQALNGVGITIERGQIYGLIGPNGAGKTTFFNVITGLYQPDTGT 61
           +Q +LK   +   FGGL+A++   +TI +G++ GLIGPNGAGKTT FN++TG+Y+P  G 
Sbjct: 5   TQPILKAEHLGITFGGLKAVSDFNMTINKGELVGLIGPNGAGKTTVFNLLTGVYKPTEGD 64

Query: 62  FELDGKPYSPSAPHEVAKAGIARTFQNIRLFGEMTVLENVMVGCHVRTRQNVFGAVFRHK 121
           F LDG+  +    ++V +AGIARTFQNIRLF ++TV ENV+V        ++ GA+FR  
Sbjct: 65  FWLDGEHMNGKKTYQVVRAGIARTFQNIRLFKQLTVEENVLVAFDESFSYHMGGAIFRTP 124

Query: 122 AAREEEAAIREKSQKLLDFVGIGQFAKRTARHLSYGDQRRLEIARALATDPQLLALDEPA 181
              ++E  + EK+  LL    +   A   A +L YG QR+LEIARALAT  +LL LDEPA
Sbjct: 125 GFWKQEHEMHEKAIDLLRIFNLEGLAATQAANLPYGQQRKLEIARALATGMKLLLLDEPA 184

Query: 182 AGMNATEKLGLRELLVKIQAE-GKTILLIEHDVKLMMGLCNRITVLDYGKPIAEGVPADV 240
           AGMN TE   L   +  I+   G  ILLIEHD+ L+M +C RI VLDYG+ IA G P  +
Sbjct: 185 AGMNPTETEDLLHCINTIRDRFGIAILLIEHDMSLVMSVCQRIQVLDYGRTIASGTPEQI 244

Query: 241 QKNPAVIEAYLGA 253
             NP VI AYLG+
Sbjct: 245 ANNPQVISAYLGS 257