Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 401 a.a., extracellular ligand-binding receptor from Marinobacter adhaerens HP15

 Score =  394 bits (1013), Expect = e-114
 Identities = 193/390 (49%), Positives = 262/390 (67%), Gaps = 3/390 (0%)

Query: 16  ALLGAAILPSAQAA--GDTIKIGFITDMSGTYADFDGQGGVEAIRMAIADAGGAINGKKV 73
           A+  A ++  AQAA   DT+KIG++ DMSGTY D  G  G++A+ MAIAD GG +NG K+
Sbjct: 9   AVASAMMVGGAQAAISNDTVKIGYLADMSGTYRDLAGPNGLKALEMAIADFGGQVNGAKI 68

Query: 74  ELVFADHQNKADIAANKAREWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKVFISVGAGT 133
           E+V AD +N  D +++  R W + + VD++ G V S+ S+A+ K+  E  ++ I  G+  
Sbjct: 69  EVVSADDRNSPDTSSSTVRRWVENEDVDLVAGMVASSVSIAVSKILEEHDRLGIISGSAA 128

Query: 134 TRQTNEECNAYTIQYAYDTTALARGTGAAITRQGGKSWYFLTADYAFGTSLEKDTSEVVK 193
           +  TNE C    I Y YDT  LA GT +A+ ++GGK+WY LTADYAFG +LE D + VV+
Sbjct: 129 SSITNEHCTPNHIHYVYDTYPLANGTASAVVKEGGKTWYMLTADYAFGHALEGDVTRVVE 188

Query: 194 SNGGNVVGATRVPLATSDFSSFLLQAQSSKAQILGLAVAGGDVINAIKAANEFGVNKT-M 252
           +NGG ++G+ R P  T DFSSF+LQAQ+S A ++GLA AG D  NAI  A+EFGV ++  
Sbjct: 189 ANGGEIIGSVRHPFPTQDFSSFILQAQASGADVIGLANAGADTTNAITTASEFGVTQSGQ 248

Query: 253 KLAGLLIFINDTHSLGLSLTQGMYLTDGWYWDLNDQTRAWANRYFMKMKKMPSMFQAGDA 312
            LA LL+F+ D H+LG    QG+ LT GWYWD+ND+TR W++R+  +    P+M  AG  
Sbjct: 249 TLAALLLFLTDVHALGAQTAQGIQLTTGWYWDMNDETREWSDRFMEETGVRPTMVHAGIY 308

Query: 313 SAVGQYLKAVKAVGSTDADKVMDYLRKNRINDFFTSNGVVRPDGRMVHDMYLMEVKKPSE 372
           S+  QYLKAV+A GS DA  V   +    IND F  NG +R DGRMVHDMYL EVK P+E
Sbjct: 309 SSAMQYLKAVEATGSDDAQTVRKQMMDTPINDMFAKNGKIRVDGRMVHDMYLAEVKTPAE 368

Query: 373 SKRPWDYYKLVQTIPGEQAYMTKAESKCAL 402
           SK  WD YK+++TIP E++Y   +ESKC L
Sbjct: 369 SKNEWDLYKILRTIPAEESYRPLSESKCKL 398