Pairwise Alignments

Query, 404 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 415 a.a., extracellular ligand-binding receptor from Marinobacter adhaerens HP15

 Score =  135 bits (341), Expect = 2e-36
 Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 24/401 (5%)

Query: 13  TACALLGAAILPSAQAAGDTIKIGFITDMSGTYADFDGQGGVEA-IRMAIADAGGAINGK 71
           +AC LL    L S     +T+KIG     +G Y D   Q  + A + +   +  G + G+
Sbjct: 9   SACLLL----LASTTVYAETLKIGLNYPQTGRYKDQGLQQRLGAFLAVDEINKAGGVMGR 64

Query: 72  KVELVFADHQNKADIAANKAREWFDRDGVDMLVGGVNSAASLAMGKVAGEKKKVFISVGA 131
           ++ELV  + +      A    E  DR+GV M+ GGV+SA ++A GK A ++ +++     
Sbjct: 65  QLELVIRNTRGDPAQGAKNTAELIDREGVQMVFGGVSSAVAIASGKAARDRNRIYFGTLT 124

Query: 132 GTTRQTNEECNAYTIQYAYDTTALARGTGAAITRQGGKSWYF-LTADYAFGTSLEKDTSE 190
            +   T  E ++Y  +  Y+    A+     +T    +  YF +TADY +G S+E+   +
Sbjct: 125 YSNATTGAEGHSYMFREPYNAWMTAKALSQYLTTNHAEDDYFYITADYTWGWSVEESVRK 184

Query: 191 VVKSNGGNVVGATRVPLA--TSDFSSFLLQAQSSKAQILGLAVAGGDVINAIKAANEFGV 248
              +   +     + P     +DF   L QA++S A++L + + G D++ A+  A E G+
Sbjct: 185 FSGTEDTDRHQGVKTPFPGHITDFREALEQAEASNAKVLMMVLFGDDMVRALNVAYEMGL 244

Query: 249 NKTMKLAGLLIFINDTHSLGLSLTQGMYLTDGWYWDL---------NDQTRAWANRYFMK 299
            K M++    + +     +G ++ +G+     W W++          +   A++ RY M+
Sbjct: 245 TKKMQIVVPNLTLGMARQVGPTIMEGVIGGSPWVWNVPYELNYPRGKEFVEAFSARYEMR 304

Query: 300 MKKMPSMFQAGDASAVGQYLKAVKAVGSTDADKVMDYLRKNRINDFFTSNGVVRPDGRMV 359
               PS   A   S V QY  AV+  G+T+   ++  L  +R             D + V
Sbjct: 305 ----PSTAAASAYSIVYQYKDAVERTGTTNTASLIRALEGHRYTFLKDEQYWREFDHQNV 360

Query: 360 HDMYLMEVKKPS---ESKRPWDYYKLVQTIPGEQAYMTKAE 397
             +Y+++VK  +     +   DY+ ++ ++PG+QA  T+ E
Sbjct: 361 QTVYVVKVKPRNTIIADEYSSDYFSIIDSMPGDQAAQTREE 401