Pairwise Alignments

Query, 423 a.a., MFS transporter from Herbaspirillum seropedicae SmR1

Subject, 413 a.a., multidrug resistance protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  179 bits (453), Expect = 2e-49
 Identities = 110/370 (29%), Positives = 183/370 (49%), Gaps = 11/370 (2%)

Query: 41  RIVLALFFSGFATFSLLYCVQPLLPIFAQEFGIGAASASLALSLSTGLLAVSIVLAGMLS 100
           R++ AL  +    +  LY +Q +LP+ A+ F +  + A+L LS+++  LA S+++  ++S
Sbjct: 14  RLMWALCVASVVVYINLYLMQGMLPLLAEHFSVPGSQATLILSVTSFSLAFSLLIYAVVS 73

Query: 101 ERYGRRELMFASLATAACCNLAAGVAPDWHLLLLARTLEGIALGGVPAVAMAYLAEEIDA 160
           +R GR   +  SL   A  NL      D++ L+  R L+GI L  VPA+AMAY  E++  
Sbjct: 74  DRIGRHTPIVVSLWLLALSNLLLIWVEDFNALVYVRFLQGILLAAVPAIAMAYFKEQLSP 133

Query: 161 AGLGFAMGLYVGGNAFGGMAGRVAMSVLAEHLGWRAGMLIIGALDLALAVAFVMMLPASR 220
           + +  A G+Y+  N+ GG+AGR+   V+++ L W+  M ++  + LA       +LP+  
Sbjct: 134 STMLKAAGIYIMANSIGGIAGRLLGGVMSQFLSWQESMWLLFLVTLAGVALTNYLLPSGA 193

Query: 221 HF-----------VRNSSMRLADHFALWRGHLRHARLPLCFAIAALNMGVFVTSYNYAGF 269
                         R+   RL   F  +  HL   ++ L +AI  +   + V  +++   
Sbjct: 194 DAKVMSGGQTSSPSRSKRARLLQDFYGFSHHLTDPQMRLAYAIGGITFMMMVNQFSFIQL 253

Query: 270 RLMSPPFSLSATVTGLIFSAYLFGMLSSSWAGALADRYGRAPLVAAGIGVSCLGLLLTCT 329
            LM+ P+  S     LIF  Y  G ++S +      ++G+  L      +  LG LLT  
Sbjct: 254 HLMAAPYEWSRFQATLIFLCYSSGTVASYFTAKWLAKFGQHKLYQWSWCLMLLGSLLTLF 313

Query: 330 SSLVLVIGGIVLLTIGFFTTHSAASSWVGRMAREGKGHAASLYLLAYYLGGSILGSVGGW 389
            + + +  G ++   GFF THS  +S+V   A   +  A SLYL  YYLG ++ G     
Sbjct: 314 DTTLTICMGFLMTACGFFLTHSCCNSFVAMRASRDRAKATSLYLCCYYLGAALGGPYLML 373

Query: 390 FWEHAGWNAV 399
           FW  A W  V
Sbjct: 374 FWHKAEWQGV 383