Pairwise Alignments

Query, 246 a.a., DNA polymerase III subunit epsilon from Enterobacter sp. TBS_079

Subject, 242 a.a., DNA polymerase III, epsilon subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  269 bits (687), Expect = 4e-77
 Identities = 137/246 (55%), Positives = 181/246 (73%), Gaps = 6/246 (2%)

Query: 1   MTAMSTAITRQIVLDTETTGMNQ-IGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDR 59
           M  +S A +RQ++LDTETTGMNQ  GA Y GH+IIEIG VEV+NRRLTG  +H Y+ P +
Sbjct: 1   MNIISNA-SRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQ 59

Query: 60  LVDPEAFGVHGIADEFLLDKPTFAEVADEFLEYIKGAELIIHNASFDIGFMDYEFSKLHR 119
            +DPEA  VHGI DE + ++P F ++A EF+++I GAE++ HNA+FD+ FMD+EFS L  
Sbjct: 60  AIDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQP 119

Query: 120 DIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNTKRTLHGALLDAQILADVYL 179
             PKT   C++ DSL +A+ + PG++N+LDALC RY IDN++R  HGALLDA+ILADVYL
Sbjct: 120 LGPKTRDICEILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYL 179

Query: 180 AMTGGQTSMKFSMENESQQTQGEAGIQRVVRQASRLRVVLASDEELLNHESRLDLVQKKG 239
           +MTGGQT  KF++ NE    +G  GIQR    +  L+V+ AS +EL+ HE RLDLV  K 
Sbjct: 180 SMTGGQT--KFNLSNEEVGQEG-GGIQRFDPTSLNLKVICASADELVMHEKRLDLV-AKS 235

Query: 240 GSCMWR 245
           G C+WR
Sbjct: 236 GKCLWR 241