Pairwise Alignments

Query, 951 a.a., valine--tRNA ligase from Escherichia coli Nissle 1917

Subject, 883 a.a., valyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  778 bits (2010), Expect = 0.0
 Identities = 429/943 (45%), Positives = 567/943 (60%), Gaps = 79/943 (8%)

Query: 1   MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD 60
           + K Y P+D+E     HWE    F P+ D   E F I+IPPPNVTG+LHMGHA   TI D
Sbjct: 6   LPKGYEPRDVESRWRAHWEGNKTFTPDLDAPGEPFSIVIPPPNVTGALHMGHALNLTIQD 65

Query: 61  TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAE 120
            + R+ R +GK  LW  GTDHAGIATQ VVER +A +EGK RHD GRE FI+++WEW+ E
Sbjct: 66  ILCRHARQKGKKVLWVPGTDHAGIATQNVVERGLA-KEGKGRHDLGREKFIERVWEWREE 124

Query: 121 SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR 180
            G  I  Q+R +G SVDW RERFTMDEGLS AV++VFV+LY + LIY+G  ++NW  +  
Sbjct: 125 YGTRILNQIRAMGASVDWTRERFTMDEGLSRAVRQVFVKLYDDGLIYKGDYIINWCNRCH 184

Query: 181 TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP 240
           TA++D EV++   K  +W +RYPLADG+        LV+ATTRPET+ GDT V V+PED 
Sbjct: 185 TALADDEVDHLPRKDHLWQLRYPLADGSGE------LVIATTRPETMFGDTAVCVHPEDE 238

Query: 241 RYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINI 300
           RY   IGK V LPL +R IP++ D + D E GTG +K+TP+HD ND+E+G RH L  + +
Sbjct: 239 RYTAFIGKMVKLPLTDREIPVIADNYVDREFGTGALKVTPSHDHNDWELGHRHKLEFLQV 298

Query: 301 LTFDGDIRESAQVFDTKGNESDIYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH 360
           +  +G + E A ++                    L +   RK VVA + A G+L + +  
Sbjct: 299 IDENGVMNEHAGIY------------------AGLTKEECRKRVVADLAAQGVLVKEEEL 340

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
           D +V +  R   VIEP ++ QW+V A  +A  A  AV     Q  P  +E  Y++W+ +I
Sbjct: 341 DHSVGHCYRCKSVIEPHVSTQWFVAASKMAPRARTAVPAAT-QIFPDNWEKTYYNWLDNI 399

Query: 421 QDWCISRQLWWGHRIPAWY-DEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSS 479
           +DWCISRQ+WWGHRIPAW   + G + V  +  E            L QDEDVLDTWFSS
Sbjct: 400 RDWCISRQIWWGHRIPAWTCGDCGKLIVAVDAPE----RCACGSANLTQDEDVLDTWFSS 455

Query: 480 ALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFH 539
           ALW FST+GWP+ T  L+ F+PTSV+V+GFDI+FFW+ARM+MM +HF+ +      VPF 
Sbjct: 456 ALWPFSTMGWPDETRELKTFYPTSVLVTGFDILFFWVARMMMMGLHFMDE------VPFR 509

Query: 540 TVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTE 599
            VY+  L+RD EG+KMSKS GNVIDPL+M+D                             
Sbjct: 510 HVYIHALVRDAEGRKMSKSTGNVIDPLEMID----------------------------- 540

Query: 600 KQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQ 659
                    +GTD+LRFTLAA A+ GRDI    +R+EGYR+F NKLWNA+RF LMN    
Sbjct: 541 --------KYGTDSLRFTLAAFAAMGRDIKLSEERIEGYRHFVNKLWNAARFALMNLPDD 592

Query: 660 DCGFNGGEMTLS-LADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLE 718
           +        T+  L  RWIL    +  ++   A+  +RF+ AA  +Y F WN+FCDWYLE
Sbjct: 593 EVPAPVDLDTVQGLHHRWILHRLEEMKESTDAAIVGYRFNDAAQGMYRFIWNEFCDWYLE 652

Query: 719 LTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIML 778
           L KP M  G E +    +H L+TVL   L L HPI+PFIT  IW     L G     + +
Sbjct: 653 LIKPDMQAGGERKA-AAQHVLLTVLRETLTLLHPIMPFITCEIWA---ALPGNAGTDLAV 708

Query: 779 QPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVN 838
           QPFP      V     A  E ++  I AVR IRAE+NIAP   L  L+R  +    + + 
Sbjct: 709 QPFPAARPGCVKAEDAARMELVQGVIGAVRTIRAELNIAPSLRLTALVRTANEHDRQVLE 768

Query: 839 ENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAK 898
           ENR  L  LARLE+    PA +    S + +V G E+++P+ G ++ E ELARL KE+ K
Sbjct: 769 ENRQMLLVLARLENAEFGPAIEAPKASASNVVSGNEVIVPLTGAVDFEAELARLDKELGK 828

Query: 899 IEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKL 941
           IE ++ ++  KLANE FV +AP  V+AKER +    A+AKAKL
Sbjct: 829 IEKDLVQVNKKLANESFVDKAPAEVVAKERARAGELADAKAKL 871