Pairwise Alignments

Query, 327 a.a., TRAP transporter substrate-binding protein from Escherichia coli Nissle 1917

Subject, 329 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Acidovorax sp. GW101-3H11

 Score =  169 bits (428), Expect = 9e-47
 Identities = 88/284 (30%), Positives = 154/284 (54%), Gaps = 4/284 (1%)

Query: 45  ALSYLADKTKEYSNGELVIRIYPNATLGNERESLELMNSGALQMVKVNAASLESFAPDYS 104
           A+  +  K    +NG L I+ +P   LG E+E +E    GA+ +++ +   + +  P+ +
Sbjct: 47  AVENMGKKLDAATNGRLKIQTFPGGVLGGEKEMIEQTQFGAINILRTSLGPVGTVVPEVN 106

Query: 105 LFSLPFLFRDRDHYYRVLQSDLGKKILN--SSESKGFVGITYYDGGARSFYSNKPITKPE 162
           +F++PF+FR +DH   V+   +G ++L   S+     V I + DGG+RS Y+ KP+  P 
Sbjct: 107 VFNMPFVFRSQDHMRAVIDGAIGDELLAKISASPAKLVAIGWMDGGSRSLYTKKPVRSPA 166

Query: 163 DLAGMKIRVQQSPSAIAMMKALGGVATPMAQGELYTALQQGVVDGGENNTVVYADMRHAE 222
           DL G K+R+  +P  +  M A+GG    M  GE++TALQ GVVDG ENN   +    H  
Sbjct: 167 DLKGQKVRMMGNPLFVDTMNAMGGNGISMGYGEVFTALQTGVVDGAENNAPSFFTSNHYS 226

Query: 223 V-AKVYSRDEHTMVPDVLIISTDVLNKLGDKERTALLKAADESMMQMKDVIWPAAEKEAY 281
             AK Y++  H ++P++L++S    +KL   ++  L K   E+ ++ +  +W  + ++  
Sbjct: 227 TGAKFYTQTNHLIIPELLVVSKVTWDKLSKDDQALLKKFGREAQLEQR-ALWDKSVEDYT 285

Query: 282 DKMKGMNATVVDVDKSAFKERVKPLYDEFKAKDAQSAKNLELVE 325
            K+K      ++VD  AF +   P+  ++ A  A   K +E V+
Sbjct: 286 AKLKAAGVEFINVDTKAFYDATAPVRAKYGANYADLMKRIEAVK 329