Pairwise Alignments

Query, 301 a.a., GTPase Era from Escherichia coli Nissle 1917

Subject, 307 a.a., GTP-binding protein Era (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  219 bits (559), Expect = 5e-62
 Identities = 123/301 (40%), Positives = 185/301 (61%), Gaps = 9/301 (2%)

Query: 8   CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLH 67
           CG++A++G PN GKSTLLN  LG K++I + +AQTTR++IVGI +E   Q I++DTPG+H
Sbjct: 8   CGWVALLGPPNAGKSTLLNSALGHKVAIVTPRAQTTRNQIVGILSEPDAQVIFMDTPGIH 67

Query: 68  MEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRD-------GKAPVI 120
            +  R +N+++ + A  S+   ++++ +++   +    + + N ++         + PVI
Sbjct: 68  QQRGR-MNKILLQTAWQSMHSADVILVMLDADLYIKKPDFLENDVKPLMDAVAAEERPVI 126

Query: 121 LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHF 180
           +AVNKVD  ++K+ +LP    L       ++ P+SA     +  +  +V+  LP A   +
Sbjct: 127 VAVNKVDLFRDKSKMLPLFIELQKLWPKAEVFPVSALKRDGLPELVKLVKSKLPVAPALY 186

Query: 181 PEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNE-RGGYDINGLILVER 239
           PED ++    RFMA+EI+REKL   L  ELPYSV VEIE++   E R    I+ +I V R
Sbjct: 187 PEDQLSTLPVRFMAAEIVREKLFLALRQELPYSVAVEIEKWDEEEGRDLVTIHAVIYVGR 246

Query: 240 EGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVD 299
              K MVIG  GA IK IG +AR D+Q++ E  VHLELWVKV+ GW +D   LRSLG  D
Sbjct: 247 PSHKSMVIGKAGATIKDIGTKARVDIQDLLEKKVHLELWVKVREGWTEDVGFLRSLGLAD 306

Query: 300 D 300
           +
Sbjct: 307 E 307