Pairwise Alignments

Query, 306 a.a., drug/metabolite exporter YedA from Escherichia coli Nissle 1917

Subject, 289 a.a., integral membrane protein PecM from Phaeobacter inhibens DSM 17395

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 14/270 (5%)

Query: 18  IIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAALIGLL 77
           +IWGS+Y V    +    PL++A +R L AG+LL+  L++R  +LPPL  +    ++G L
Sbjct: 14  MIWGSSYIVTTTLLPGQSPLLVALLRALPAGLLLM--LMVR--QLPPLNWVPRLLVLGAL 69

Query: 78  LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLF---GIKTRKLEWVGIAIGLA 134
             ++   ++ VA ++ +P G+AA + A  PL  +  S L     ++T  +   G++I   
Sbjct: 70  NFSIFWSLLFVAAYR-LPGGVAATLGAVQPLVVVFLSALMLKTPVRTAAVLAAGLSILGV 128

Query: 135 GIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMI 194
            +++L     L G   G    L G+I+ A G V   +   PV ++      L AG +L+I
Sbjct: 129 ALLVLTPSAQLDG--IGVFAGLAGAIAMAAGVVLSRKWQPPVSLLTFTAWQLTAGGLLLI 186

Query: 195 ASMIAGEKLTALPSLS--GFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVV 252
              +    L A P LS    L + Y++L G       +   I  + P++ +    ++P+ 
Sbjct: 187 P--VTLWSLPAFPQLSAENLLGLAYMSLIGGAATYVLWFRGIARLEPSVVSLLGVLSPLS 244

Query: 253 AVLLGTGLGGETLSKIEWLALGVIVFAVVL 282
           AV+LG    GE L+  +    G+ +F++ L
Sbjct: 245 AVVLGWVFLGEVLTAKQATGAGLALFSLWL 274