Pairwise Alignments

Query, 306 a.a., drug/metabolite exporter YedA from Escherichia coli Nissle 1917

Subject, 315 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  134 bits (336), Expect = 4e-36
 Identities = 91/294 (30%), Positives = 157/294 (53%), Gaps = 13/294 (4%)

Query: 4   RQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLP 63
           R L  +  A F +Y++WGSTYF I + ++ + P ++  +RF  AG++LL    LRG ++ 
Sbjct: 9   RNLPGVIIAYFLIYVVWGSTYFFIGVALKDFSPFLLGALRFTTAGLILLGICYLRGEQIF 68

Query: 64  PLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIKTRK 123
               +  +A+ G++LL V   +V +A+     S +A +  +T     L    ++    R 
Sbjct: 69  KKSLVKRSAVSGIVLLFVDMAVVMLAQRYLTSSLVAIIASSTALWILLLDVPMWRTNFRN 128

Query: 124 -LEWVGIAIGLAGIIM-----LNSGGNLSGNPWGAILILIGSISWAFGSVYG---SRITL 174
            L   G  IG  G++M     LN+      +  G +L++ G ISWA G++Y    S    
Sbjct: 129 PLTIAGGGIGFGGVVMLYAEQLNAEWLHPQSERGILLLVFGCISWALGTLYAKYRSSREE 188

Query: 175 PVGMMAG-AIEMLAAGVVLMIASMIAGEKLTA---LPSLSGFLAVGYLALFGSIIAINAY 230
            V   AG A +ML A V+  I +++ G+   A     S++ + ++ YL  FGS++A +AY
Sbjct: 189 EVNAFAGSAWQMLFASVMFWICAVVNGDVREADLSTVSVTSWFSLLYLISFGSLLAYSAY 248

Query: 231 MYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVT 284
           ++L++    A   ++AYVNP +AVLLG   G E ++ ++   L VI+  V+L++
Sbjct: 249 VWLLKVRPAAEVGTHAYVNPFIAVLLGVSFGNEQVTFVQLSGLLVILLGVMLIS 302