Pairwise Alignments

Query, 561 a.a., long-chain-fatty-acid--CoA ligase FadD from Escherichia coli Nissle 1917

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  778 bits (2009), Expect = 0.0
 Identities = 385/555 (69%), Positives = 452/555 (81%), Gaps = 1/555 (0%)

Query: 1   MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRA 60
           M + W+N  P DVP EIN D+Y SLVDMFE +VA+YADQPAF+NMG  +T+RKLEERSRA
Sbjct: 1   MDQPWINHLPKDVPAEINADQYSSLVDMFETAVAKYADQPAFINMGATLTYRKLEERSRA 60

Query: 61  FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS 120
           FAAYLQ  L L+KGDRVALMMPNLLQYP+ALFGILRAGM+VVNVNPLYTPREL+HQL DS
Sbjct: 61  FAAYLQNELKLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLVDS 120

Query: 121 GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL 180
           GA AIV+VSNFA TLE+VVD+T V+ VI+T +GD LS  K T+VNFVVKYIK+LVPKY L
Sbjct: 121 GAKAIVVVSNFARTLEEVVDQTPVKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDL 180

Query: 181 PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA 240
           P A+S R  L  G RMQYVKP +  +DLAFLQYTGGTTGV+KGAMLTH+N++AN+ Q N 
Sbjct: 181 PHALSMRETLSRGRRMQYVKPVITGDDLAFLQYTGGTTGVSKGAMLTHKNVVANVLQANG 240

Query: 241 TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF 300
            Y P L  G E VVTALPLYHIFALT+NCLLF+  G QNLLITNPRDIPG V EL KYPF
Sbjct: 241 AYSPALRDGNEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPF 300

Query: 301 TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT 360
           TA+TGVNTLFNAL+N+ +F +LDFS L LS GGGM VQ+ VA++W  +T   LLEGYGLT
Sbjct: 301 TALTGVNTLFNALVNSSDFAELDFSRLKLSIGGGMAVQKAVADKWQSITKTRLLEGYGLT 360

Query: 361 ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ 420
           E +PL++  PY++D ++GSIG P PST  ++ DD  N +P G+ GEL  KGPQ+M GYWQ
Sbjct: 361 EASPLLTCCPYNLDGYNGSIGFPAPSTLIQVRDDAGNVLPQGETGELFGKGPQIMKGYWQ 420

Query: 421 RPDATDEII-KNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPG 479
           RP+ T ++I K+GWL TGDI  MDE+GF  IVDRKKDMILVSGFNV+PNE+E+VV  HP 
Sbjct: 421 RPEETAKVIDKDGWLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK 480

Query: 480 VQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKS 539
           V EVAAVGVP+ +SGE VK+FVV KD SLT + ++  CR  LTGYKVPKLVEFRDELPK+
Sbjct: 481 VIEVAAVGVPNDASGELVKVFVVAKDKSLTADDIIKHCRAHLTGYKVPKLVEFRDELPKT 540

Query: 540 NVGKILRRELRDEAR 554
           NVGKILRRELRDE +
Sbjct: 541 NVGKILRRELRDEVK 555