Pairwise Alignments

Query, 430 a.a., ABC transporter substrate-binding protein from Escherichia coli Nissle 1917

Subject, 431 a.a., extracellular solute-binding protein family 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 95/363 (26%), Positives = 153/363 (42%), Gaps = 60/363 (16%)

Query: 3   KSKIVLLSALVSCALISGCKEENKNNVSIEFMHSSVEQERQAVISKLIARFEKENPGITV 62
           K+  +  +AL+S  L++G     K N++  F   SV      ++  +  +F KE+P I V
Sbjct: 6   KACTLAAAALLSLTLLAGTALAEKVNLTFYFP-VSVGGPITKIVEGMTEQFMKEHPDIKV 64

Query: 63  KQVPVEEDAYN---TKVITLSRSGSLPEV-IETSHDYAKVMDKEQLIDRQAVATVISNVG 118
              PV    Y    TK +T  R G  P V +  S D   ++D++ ++    +        
Sbjct: 65  --TPVYAGIYRETLTKALTALRGGEPPHVAVLLSTDMYTLIDEDAVVAYDDILKPEEMGF 122

Query: 119 EGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEE---PKNWQQLLDVA 175
             AF+ G +R  +T  G  W G+P       +++ K+    AGL+    P NW +L+++ 
Sbjct: 123 TKAFFPGFMRNSQT-GGKTW-GIPFQRSTIVMYWNKEAFKAAGLDPEKGPANWNELVEMG 180

Query: 176 QKL--NDPANK--KYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKIT-LDTPEMMQA 230
           +KL   D + K  ++G+A+P+  +      F   A+ N   + NAEG  T  D P+ ++A
Sbjct: 181 KKLTVRDASGKVTQWGVAIPS--TGYAYWMFQALAIQNGVELMNAEGTRTDFDNPKAIEA 238

Query: 231 LTYYRNLAAN------------TMPGSNDIMEVKDAFMNGT----------APMAIYSTY 268
           L +  +LA              T P   D  E K A M  T          AP   +   
Sbjct: 239 LQFLVDLAYKHEVSPKGTIDWATTP--RDFFERKSAIMWTTTGNLTNVRTNAPFP-FGVG 295

Query: 269 ILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKAEETEAAEKFVTFMEQADNI 328
           +LPA  + G P   G       N  ++   T           E +AA  FV +M  A+  
Sbjct: 296 MLPASARPGSPTGGG-------NFYIFKKAT---------PAERKAAVDFVQWMTSAERA 339

Query: 329 ADW 331
           A W
Sbjct: 340 AQW 342